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    RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase [ Lagenorhynchus obliquidens (Pacific white-sided dolphin) ]

    Gene ID: 113633375, updated on 15-Mar-2024

    Summary

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    Gene symbol
    RNF19A
    Gene description
    ring finger protein 19A, RBR E3 ubiquitin protein ligase
    See related
    EnsemblRapid:ENSLOBG00000010396
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lagenorhynchus obliquidens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus
    Orthologs
    human mouse all
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    Genomic context

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    See RNF19A in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020837983.1 (10357462..10439678, complement)

    NW_020837983.1Genomic Context describing neighboring genes Neighboring gene F-box protein 43 Neighboring gene RNA polymerase II, I and III subunit K Neighboring gene sperm associated antigen 1 Neighboring gene sal-like protein 4 pseudogene Neighboring gene uncharacterized LOC113633378

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020837983 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF19A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM367639v1 Primary Assembly

    Genomic

    1. NW_020837983.1 Reference ASM367639v1 Primary Assembly

      Range
      10357462..10439678 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027131514.1 → XP_026987315.1  E3 ubiquitin-protein ligase RNF19A isoform X2

      Related
      ENSLOBP00000014113.1, ENSLOBT00000015495.1
      Conserved Domains (5) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      NF033849
      Location:432 → 664
      ser_rich_anae_1; serine-rich protein
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    2. XM_027131513.1 → XP_026987314.1  E3 ubiquitin-protein ligase RNF19A isoform X2

      Conserved Domains (5) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      NF033849
      Location:432 → 664
      ser_rich_anae_1; serine-rich protein
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    3. XM_027131512.1 → XP_026987313.1  E3 ubiquitin-protein ligase RNF19A isoform X1

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:311 → 349
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:375 → 464
      AzlC; AzlC protein

    4. XM_027131515.1 → XP_026987316.1  E3 ubiquitin-protein ligase RNF19A isoform X3

      Conserved Domains (3) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:311 → 349
      IBR; IBR domain, a half RING-finger domain

    5. XM_027131517.1 → XP_026987318.1  E3 ubiquitin-protein ligase RNF19A isoform X4

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:311 → 349
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:375 → 464
      AzlC; AzlC protein

    6. XM_027131510.1 → XP_026987311.1  E3 ubiquitin-protein ligase RNF19A isoform X1

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:311 → 349
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:375 → 464
      AzlC; AzlC protein

    7. XM_027131511.1 → XP_026987312.1  E3 ubiquitin-protein ligase RNF19A isoform X1

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:311 → 349
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:375 → 464
      AzlC; AzlC protein

    RNA

    1. XR_003438163.1 RNA Sequence

    2. XR_003438164.1 RNA Sequence

    3. XR_003438162.1 RNA Sequence

    4. XR_003438161.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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