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    LAC7 laccase 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820078, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LAC7
    Official Full Name
    laccase 7
    Primary source
    TAIR:AT3G09220
    Locus tag
    AT3G09220
    See related
    Araport:AT3G09220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    laccase 7
    Summary
    putative laccase, a member of laccase family of genes (17 members in Arabidopsis).
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    Genomic context

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    See LAC7 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (2827190..2830655, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Concanavalin A-like lectin family protein Neighboring gene Ribosomal protein L10 family protein Neighboring gene plastid transcriptionally active 13 Neighboring gene myb domain protein 1 Neighboring gene kinase with tetratricopeptide repeat domain-containing protein Neighboring gene Nuclear transport factor 2 (NTF2) family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001337807.1
    NM_111756.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydroquinone:oxygen oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    laccase 7
    NP_187533.1
    • laccase 7 (LAC7); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 10354 Blast hits to 8703 proteins in 1520 species: Archae - 53; Bacteria - 4205; Metazoa - 505; Fungi - 3603; Plants - 1597; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2827190..2830655 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111756.3 → NP_187533.1  laccase 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187533.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SR40
      UniProtKB/TrEMBL
      A0A5S9XAC7, A0A654F5H8
      Conserved Domains (1) summary
      TIGR03389
      Location:23 → 550
      laccase; plant

    2. NM_001337807.1 → NP_001326525.1  laccase 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V5P5, A0A1I9LPJ4, A0A384KUM7, A0A654F5H8
      Conserved Domains (1) summary
      TIGR03389
      Location:2 → 453
      laccase; plant
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SR40.1

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