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    SNARE-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828897, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SNARE-like superfamily protein
    Primary source
    TAIR:AT4G27840
    Locus tag
    AT4G27840
    See related
    Araport:AT4G27840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T27E11.80; T27E11_80
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (13864919..13866607, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene beta glucosidase 9 Neighboring gene ncRNA Neighboring gene beta glucosidase 10 Neighboring gene uncharacterized protein Neighboring gene Glycine-rich protein family Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118922.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    SNARE-like superfamily protein
    NP_194513.1
    • SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G52990.1); Has 279 Blast hits to 279 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13864919..13866607 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118922.5 → NP_194513.1  SNARE-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194513.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9STP2
      UniProtKB/TrEMBL
      A0A178USP2, A0A5S9XWG9, A0A654FTG4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9STP2.1

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