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    Tinf2 TERF1 interacting nuclear factor 2 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100770148, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Tinf2
    Gene description
    TERF1 interacting nuclear factor 2
    Locus tag
    I79_008536
    See related
    Ensembl:ENSCGRG00015017586
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Tinf2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613875.1 (1038662..1044191)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (210883506..210889035, complement)

    NW_003613875.1Genomic Context describing neighboring genes Neighboring gene Rab geranylgeranyltransferase subunit alpha Neighboring gene transglutaminase 1 Neighboring gene guanosine monophosphate reductase 2 Neighboring gene NEDD8 ubiquitin like modifier Neighboring gene magnesium-dependent phosphatase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables telomeric DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of telomere maintenance via telomere lengthening IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in telomere capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of shelterin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TERF1-interacting nuclear factor 2
    Names
    TERF1 (TRF1)-interacting nuclear factor 2
    TERF1-interacting nuclear factor 2-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613875.1 Reference CriGri_1.0 Primary Assembly

      Range
      1038662..1044191
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003502089.5 → XP_003502137.1  TERF1-interacting nuclear factor 2 isoform X1

      See identical proteins and their annotated locations for XP_003502137.1

      UniProtKB/TrEMBL
      A0A8C2MF71, A0A9J7F3F7
      Conserved Domains (2) summary
      cd11741
      Location:244 → 347
      TIN2_TBM; TRF-binding motif region of TRF-Interacting Nuclear factor 2
      pfam14973
      Location:20 → 162
      TINF2_N; TERF1-interacting nuclear factor 2 N-terminus

    2. XM_007642670.4 → XP_007640860.1  TERF1-interacting nuclear factor 2 isoform X2

      See identical proteins and their annotated locations for XP_007640860.1

      UniProtKB/TrEMBL
      A0A9J7J9J4, G3HDD2
      Conserved Domains (2) summary
      cd11741
      Location:244 → 347
      TIN2_TBM; TRF-binding motif region of TRF-Interacting Nuclear factor 2
      pfam14973
      Location:20 → 162
      TINF2_N; TERF1-interacting nuclear factor 2 N-terminus

    3. XM_007642671.3 → XP_007640861.1  TERF1-interacting nuclear factor 2 isoform X3

      See identical proteins and their annotated locations for XP_007640861.1

      UniProtKB/TrEMBL
      A0A9J7F2V5, G3HDD2
      Conserved Domains (2) summary
      cd11741
      Location:244 → 347
      TIN2_TBM; TRF-binding motif region of TRF-Interacting Nuclear factor 2
      pfam14973
      Location:20 → 162
      TINF2_N; TERF1-interacting nuclear factor 2 N-terminus

    4. XM_007642673.4 → XP_007640863.1  TERF1-interacting nuclear factor 2 isoform X4

      See identical proteins and their annotated locations for XP_007640863.1

      UniProtKB/TrEMBL
      A0A9J7F2R9, G3HDD2
      Conserved Domains (2) summary
      cd11741
      Location:244 → 347
      TIN2_TBM; TRF-binding motif region of TRF-Interacting Nuclear factor 2
      pfam14973
      Location:20 → 162
      TINF2_N; TERF1-interacting nuclear factor 2 N-terminus

    RNA

    1. XR_004773249.1 RNA Sequence

    2. XR_482297.4 RNA Sequence

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NW_023276807.1 Alternate CriGri-PICRH-1.0

      Range
      210883506..210889035 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027390543.2 → XP_027246344.1  TERF1-interacting nuclear factor 2 isoform X3

      UniProtKB/TrEMBL
      A0A9J7F2V5, G3HDD2
      Related
      ENSCGRP00015056107.1, ENSCGRT00015070545.1

    2. XM_027390541.2 → XP_027246342.1  TERF1-interacting nuclear factor 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C2MF71, A0A9J7F3F7

    3. XM_027390542.2 → XP_027246343.1  TERF1-interacting nuclear factor 2 isoform X2

      UniProtKB/TrEMBL
      A0A9J7J9J4, G3HDD2

    4. XM_027390544.2 → XP_027246345.1  TERF1-interacting nuclear factor 2 isoform X4

      UniProtKB/TrEMBL
      A0A9J7F2R9, G3HDD2

    RNA

    1. XR_004772530.1 RNA Sequence

      Related
      ENSCGRT00015028423.2

    2. XR_003480165.2 RNA Sequence

      Related
      ENSCGRT00015028358.2
    Nucleotide Protein Strain
    Heading Accession and Version

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