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    LBRM_13_0890 putative proteasome regulatory ATPase subunit 2 [ Leishmania braziliensis MHOM/BR/75/M2904 ]

    Gene ID: 5413726, updated on 30-Oct-2024

    Summary

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    Gene symbol
    LBRM_13_0890
    Gene description
    putative proteasome regulatory ATPase subunit 2
    Locus tag
    LBRM_13_0890
    Gene type
    protein coding
    RNA name
    putative proteasome regulatory ATPase subunit 2
    RefSeq status
    PROVISIONAL
    Organism
    Leishmania braziliensis MHOM/BR/75/M2904 (strain: MHOM/BR/75/M2904)
    Lineage
    Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania braziliensis species complex
    Orthologs
    Leishmania major all
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    Genomic context

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    Location:
    chromosome: 13
    Exon count:
    1
    Sequence:
    Chromosome: 13; NC_009305.2 (321975..323279, complement)

    Chromosome 13 - NC_009305.2Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein Neighboring gene putative NADH-cytochrome b5 reductase Neighboring gene putative leucyl-tRNA synthetase Neighboring gene conserved hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009305.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
    2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proteasome-activating activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome regulatory particle, base subcomplex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    putative proteasome regulatory ATPase subunit 2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009305.2 Reference assembly

      Range
      321975..323279 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001563181.1 → XP_001563231.1  putative proteasome regulatory ATPase subunit 2 [Leishmania braziliensis MHOM/BR/75/M2904]

      See identical proteins and their annotated locations for XP_001563231.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3P3Z0Z2, A4H795
      Conserved Domains (3) summary
      PTZ00361
      Location:3 → 434
      PTZ00361; 26 proteosome regulatory subunit 4-like protein; Provisional
      pfam00004
      Location:216 → 348
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam16450
      Location:104 → 170
      Prot_ATP_ID_OB; Proteasomal ATPase OB/ID domain
    Nucleotide Protein
    Heading Accession and Version

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