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    SS1G_07098 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

    Gene ID: 5487869, updated on 16-Nov-2023

    Summary

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    Gene symbol
    SS1G_07098
    Gene description
    hypothetical protein
    Locus tag
    SS1G_07098
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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    Genomic context

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    See SS1G_07098 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    9

    NW_001820827.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Delta(14)-sterol reductase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001820827.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in secondary metabolite biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001820827.1 Reference assembly

      Range
      419676..429661
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001591602.1 → XP_001591652.1  hypothetical protein SS1G_07098 [Sclerotinia sclerotiorum 1980 UF-70]

      See identical proteins and their annotated locations for XP_001591652.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1D9Q659, A7EP49
      Conserved Domains (9) summary
      cd05195
      Location:1807 → 2104
      enoyl_red; enoyl reductase of polyketide synthase
      smart00823
      Location:2346 → 2424
      PKS_PP; Phosphopantetheine attachment site
      smart00827
      Location:556 → 873
      PKS_AT; Acyl transferase domain in polyketide synthase (PKS) enzymes
      smart00829
      Location:1811 → 2104
      PKS_ER; Enoylreductase
      COG3321
      Location:3 → 1032
      PksD; Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]
      cd00833
      Location:7 → 410
      PKS; polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or ...
      pfam00755
      Location:2458 → 3016
      Carn_acyltransf; Choline/Carnitine o-acyltransferase
      pfam08242
      Location:1447 → 1552
      Methyltransf_12; Methyltransferase domain
      pfam14765
      Location:946 → 1233
      PS-DH; Polyketide synthase dehydratase
    Nucleotide Protein
    Heading Accession and Version

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