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    rpoB DNA-directed RNA polymerase subunit B [ Halorussus pelagicus ]

    Gene ID: 38834973, updated on 24-Oct-2024

    Summary

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    Gene symbol
    rpoB
    Gene description
    DNA-directed RNA polymerase subunit B
    Locus tag
    EP007_RS09145
    Gene type
    protein coding
    Organism
    Halorussus pelagicus (strain: RC-68, type-material: type strain of Halorussus pelagicus)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Haladaptataceae; Halorussus
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    Genomic context

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    NZ_CP035119.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase subunit H Neighboring gene DNA-directed RNA polymerase subunit B'' Neighboring gene DNA-directed RNA polymerase subunit A' Neighboring gene DNA-directed RNA polymerase subunit A''

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP035119.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and physical mapping of RNA polymerase genes from Methanobacterium thermoautotrophicum and comparison of homologies and gene orders with those of RNA polymerase genes from other methanogenic archaebacteria. Schallenberg J, et al. J Bacteriol, 1988 May. PMID 2834336, Free PMC Article
    2. Nucleotide sequence of the genes encoding the three largest subunits of the DNA-dependent RNA polymerase from the archaeum Thermococcus celer. Klenk HP, et al. Nucleic Acids Res, 1992 Sep 11. PMID 1408768, Free PMC Article
    3. The X-ray crystal structure of RNA polymerase from Archaea. Hirata A, et al. Nature, 2008 Feb 14. PMID 18235446, Free PMC Article
    4. Organization and nucleotide sequence of the genes encoding the large subunits A, B and C of the DNA-dependent RNA polymerase of the archaebacterium Sulfolobus acidocaldarius. Pühler G, et al. Nucleic Acids Res, 1989 Jun 26. PMID 2501756, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase subunit B
    WP_128477363.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP035119.1 Reference assembly

      Range
      1832970..1834796
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_128477363.1 DNA-directed RNA polymerase subunit B [Halorussus pelagicus]

      UniProtKB/TrEMBL
      A0A4D6Q6C7
      Conserved Domains (1) summary
      PRK07225
      Location:3 → 608
      PRK07225; DNA-directed RNA polymerase subunit B'; Validated
    Nucleotide Protein
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