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    LOC114196721 somatotropin [ Eumetopias jubatus (Steller sea lion) ]

    Gene ID: 114196721, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC114196721
    Gene description
    somatotropin
    See related
    EnsemblRapid:ENSEJUG00000014014
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Eumetopias jubatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias
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    Genomic context

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    See LOC114196721 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM402803v1 (GCF_004028035.1) Unplaced Scaffold NW_020998752.1 (1818504..1820248)

    NW_020998752.1Genomic Context describing neighboring genes Neighboring gene sodium voltage-gated channel alpha subunit 4 Neighboring gene CD79b molecule Neighboring gene intercellular adhesion molecule 5 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit D2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020998752 Unplaced Scaffold Reference ASM402803v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables growth hormone receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in growth hormone receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of growth IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of receptor signaling pathway via JAK-STAT IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of tyrosine phosphorylation of STAT protein IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to nutrient levels IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    somatotropin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Eumetopias jubatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM402803v1 Primary Assembly

    Genomic

    1. NW_020998752.1 Reference ASM402803v1 Primary Assembly

      Range
      1818504..1820248
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028087492.1 → XP_027943293.1  somatotropin isoform X1

      Related
      ENSEJUP00000019049.1, ENSEJUT00000021283.1
      Conserved Domains (1) summary
      cd10285
      Location:101 → 280
      somatotropin_like; Somatotropin or growth hormone (GH), placental lactogen, and related pituitary gland hormones

    2. XM_028087493.1 → XP_027943294.1  somatotropin isoform X2

      Related
      ENSEJUP00000019081.1, ENSEJUT00000021327.1
      Conserved Domains (1) summary
      cd10285
      Location:6 → 185
      somatotropin_like; Somatotropin or growth hormone (GH), placental lactogen, and related pituitary gland hormones
    Nucleotide Protein
    Heading Accession and Version

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