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    trmt112 tRNA methyltransferase activator subunit 11-2 [ Xiphophorus couchianus (Monterrey platyfish) ]

    Gene ID: 114139437, updated on 15-Mar-2024

    Summary

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    Gene symbol
    trmt112
    Gene description
    tRNA methyltransferase activator subunit 11-2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xiphophorus couchianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
    Orthologs
    human zebrafish all
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    Genomic context

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    See trmt112 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current X_couchianus-1.0 (GCF_001444195.1) 23 NC_040250.1 (13225332..13229636, complement)

    Chromosome 23 - NC_040250.1Genomic Context describing neighboring genes Neighboring gene potassium channel, subfamily K, member 4a Neighboring gene transforming growth factor, beta 5 Neighboring gene autophagy related 2A Neighboring gene nuclear RNA export factor 1a Neighboring gene uncharacterized LOC114139405

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_040250.1 Chromosome 23 Reference X_couchianus-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-glutamine methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in rRNA (guanine-N7)-methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    multifunctional methyltransferase subunit TRM112-like protein
    Names
    tRNA methyltransferase subunit 11-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference X_couchianus-1.0 Primary Assembly

    Genomic

    1. NC_040250.1 Reference X_couchianus-1.0 Primary Assembly

      Range
      13225332..13229636 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028009387.1 → XP_027865188.1  multifunctional methyltransferase subunit TRM112-like protein

      UniProtKB/TrEMBL
      A0A3B5KTH5
      Conserved Domains (1) summary
      cd21089
      Location:2 → 118
      Trm112-like; eukaryotic tRNA methyltransferase 112, a partner protein of both rRNA/tRNA and protein methyltransferases, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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