U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    c6ast1 six-cysteine containing astacin protease 1 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 100049315, updated on 8-Mar-2024

    Summary

    Gene symbol
    c6ast1
    Gene description
    six-cysteine containing astacin protease 1
    See related
    EnsemblRapid:ENSORLG00000000220
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Also known as
    mnep
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See c6ast1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 3 NC_019861.2 (4553794..4559772, complement)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 3 NC_019861.1 (3148088..3154066, complement)

    Chromosome 3 - NC_019861.2Genomic Context describing neighboring genes Neighboring gene mitochondrial carrier homolog 2 Neighboring gene putative nuclease HARBI1 Neighboring gene astacin like metallo-protease Neighboring gene Fas (tnfrsf6)-associated via death domain

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    six-cysteine containing astacin protease 1
    Names
    nephrosin
    NP_001098206.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001104736.2NP_001098206.1  six-cysteine containing astacin protease 1 precursor

      See identical proteins and their annotated locations for NP_001098206.1

      Status: PROVISIONAL

      Source sequence(s)
      AB256945
      UniProtKB/TrEMBL
      H2L3F6, Q14TH8
      Related
      ENSORLP00000000274.2, ENSORLT00000000274.3
      Conserved Domains (2) summary
      cd04283
      Location:92273
      ZnMc_hatching_enzyme; Zinc-dependent metalloprotease, hatching enzyme-like subfamily. Hatching enzymes are secreted by teleost embryos to digest the egg envelope or chorion. In some teleosts, the hatching enzyme may be a system consisting of two evolutionary related ...
      pfam01400
      Location:86275
      Astacin; Astacin (Peptidase family M12A)

    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019861.2 Reference ASM223467v1 Primary Assembly

      Range
      4553794..4559772 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)