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    LOC114403928 putative G3BP-like protein [ Glycine soja ]

    Gene ID: 114403928, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC114403928
    Gene description
    putative G3BP-like protein
    Locus tag
    D0Y65_054653
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine soja
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC114403928 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current ASM419377v2 (GCF_004193775.1) 20 NC_041021.1 (46792127..46797107, complement)

    Chromosome 20 - NC_041021.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114401343 Neighboring gene uncharacterized LOC114403762 Neighboring gene uncharacterized LOC114401677 Neighboring gene pentatricopeptide repeat-containing protein At1g25360-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041021.1 Chromosome 20 Reference ASM419377v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative G3BP-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM419377v2 Primary Assembly

    Genomic

    1. NC_041021.1 Reference ASM419377v2 Primary Assembly

      Range
      46792127..46797107 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028367161.1 → XP_028222962.1  putative G3BP-like protein isoform X1

      UniProtKB/TrEMBL
      A0A445F7R4
      Conserved Domains (2) summary
      cd00780
      Location:10 → 130
      NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
      cd00590
      Location:313 → 384
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_028367163.1 → XP_028222964.1  putative G3BP-like protein isoform X3

      UniProtKB/TrEMBL
      A0A445F7R4
      Conserved Domains (2) summary
      cd00780
      Location:1 → 66
      NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
      cd00590
      Location:249 → 320
      RRM_SF; RNA recognition motif (RRM) superfamily

    3. XM_028367162.1 → XP_028222963.1  putative G3BP-like protein isoform X2

      UniProtKB/TrEMBL
      A0A445F7R4, A0A445F7V5
      Conserved Domains (2) summary
      cd00780
      Location:10 → 130
      NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
      cd00590
      Location:311 → 382
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
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