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    yodR putative acyloate-acetoacetate CoA-transferase [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 940048, updated on 12-Feb-2021

    Summary

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    Gene symbol
    yodR
    Gene description
    putative acyloate-acetoacetate CoA-transferase
    Locus tag
    BSU_19720
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU19720
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    Genomic context

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    Sequence:
    NC_000964.3 (2143022..2143675, complement)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene lysine 2,3-aminomutase Neighboring gene epsilon-amino-beta-lysine acetyl transferase Neighboring gene putative deacetylase Neighboring gene putative oxoacid CoA-transferase Neighboring gene putative aminovalerate aminotransferase Neighboring gene hypothetical protein Neighboring gene putative toxin of a type I toxin family (sporulation operon) Neighboring gene protein involved in maturation of the outermost layer of the spore

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative acyloate-acetoacetate CoA-transferase
    NP_389853.1
    • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15150230, 21538109, 24914178; Product type e: enzyme

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      2143022..2143675 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_389853.1 putative acyloate-acetoacetate CoA-transferase [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_389853.1

      Status: PROVISIONAL

      Conserved Domains (1) summary
      cl00339
      Location:8 → 212
      SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O34466.1

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    Other Literature Sources
    Molecular Biology Databases