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    PAS_chr2-2_0104 RNA polymerase II subunit B32 [ Komagataella phaffii GS115 ]

    Gene ID: 8199208, updated on 11-Apr-2024

    Summary

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    Gene symbol
    PAS_chr2-2_0104
    Gene description
    RNA polymerase II subunit B32
    Locus tag
    PAS_chr2-2_0104
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Komagataella phaffii GS115 (strain: GS115)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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    Genomic context

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    See PAS_chr2-2_0104 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_012964.1 (2182905..2183465, complement)

    Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene putative U3 snoRNP protein Neighboring gene Mannosyltransferase involved in N-linked protein glycosylation Neighboring gene Serine-threonine protein kinase that is part of a glucose-sensing system Neighboring gene Essential constituent of the mitochondrial inner membrane presequence translocase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012964.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA export from nucleus in response to heat stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of RNA polymerase II, core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA polymerase II subunit B32

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012964.1 Reference assembly

      Range
      2182905..2183465 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002492058.1 → XP_002492103.1  RNA polymerase II subunit B32 [Komagataella phaffii GS115]

      See identical proteins and their annotated locations for XP_002492103.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C4R2U9, F2QQX8
      Conserved Domains (1) summary
      cl00638
      Location:18 → 185
      RNA_pol_Rpb4; RNA polymerase Rpb4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    5X4Z_D.1
    5X4Z_P.1
    5X50_D.1
    5X51_D.1
    5X51_P.1
    5XOG_D.1
    5XON_D.1
    6A5L_D.1
    6A5O_D.1
    6A5P_D.1
    6A5R_D.1
    6A5T_D.1
    6A5U_D.1
    6INQ_D.1
    6IR9_D.1
    6J4W_D.1
    6J4X_D.1
    6J4Y_D.1
    6J4Z_D.1
    6J50_D.1
    6J51_D.1

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