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    Rin1 Ras and Rab interactor 1 [ Grammomys surdaster ]

    Gene ID: 114624303, updated on 15-Mar-2024

    Summary

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    Gene symbol
    Rin1
    Gene description
    Ras and Rab interactor 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Grammomys surdaster
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Grammomys
    Orthologs
    human mouse all
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    Genomic context

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    See Rin1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current NIH_TR_1.0 (GCF_004785775.1) Unplaced Scaffold NW_021604650.1 (2865267..2869950, complement)

    NW_021604650.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene CD248 molecule Neighboring gene BRMS1 transcriptional repressor and anoikis regulator Neighboring gene beta-1,4-glucuronyltransferase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_021604650 Unplaced Scaffold Reference NIH_TR_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras and Rab interactor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Grammomys surdaster Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NIH_TR_1.0

    Genomic

    1. NW_021604650.1 Reference NIH_TR_1.0

      Range
      2865267..2869950 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028771216.1 → XP_028627049.1  ras and Rab interactor 1 isoform X1

      Conserved Domains (3) summary
      smart00167
      Location:513 → 631
      VPS9; Domain present in VPS9
      cd10393
      Location:81 → 181
      SH2_RIN1; Src homology 2 (SH2) domain found in Ras and Rab interactor 1 (RIN1)-like proteins
      cl28922
      Location:649 → 729
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_028771217.1 → XP_028627050.1  ras and Rab interactor 1 isoform X2

      Conserved Domains (3) summary
      smart00167
      Location:429 → 546
      VPS9; Domain present in VPS9
      cd10393
      Location:57 → 157
      SH2_RIN1; Src homology 2 (SH2) domain found in Ras and Rab interactor 1 (RIN1)-like proteins
      cl28922
      Location:564 → 644
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    Nucleotide Protein
    Heading Accession and Version

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