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    spire1b spire-type actin nucleation factor 1b [ Denticeps clupeoides (denticle herring) ]

    Gene ID: 114791306, updated on 15-Mar-2024

    Summary

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    Gene symbol
    spire1b
    Gene description
    spire-type actin nucleation factor 1b
    See related
    Ensembl:ENSDCDG00000020836
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Denticeps clupeoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Denticipitoidei; Denticipitidae; Denticeps
    Orthologs
    zebrafish all
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    Genomic context

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    See spire1b in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current fDenClu1.1 (GCF_900700375.1) 5 NC_041711.1 (4774348..4793679, complement)

    Chromosome 5 - NC_041711.1Genomic Context describing neighboring genes Neighboring gene antizyme inhibitor 1a Neighboring gene ATPase H+ transporting V1 subunit C1a Neighboring gene BAALC binder of MAP3K1 and KLF4 a Neighboring gene centrosomal protein 72 Neighboring gene tubulin polymerization promoting protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041711.1 Chromosome 5 Reference fDenClu1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi vesicle transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cleavage furrow formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of meiotic spindle localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in polar body extrusion after meiotic divisions IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell cortex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein spire homolog 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Denticeps clupeoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fDenClu1.1

    Genomic

    1. NC_041711.1 Reference fDenClu1.1

      Range
      4774348..4793679 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028982048.1 → XP_028837881.1  protein spire homolog 1-like isoform X2

      UniProtKB/TrEMBL
      A0A8C4AV12, A0A8C4AX50
      Related
      ENSDCDP00000029244.1, ENSDCDT00000038382.1
      Conserved Domains (2) summary
      cd15767
      Location:599 → 761
      FYVE_SPIR1; FYVE-related domain found in protein spire homolog 1 (Spire1) and similar proteins
      pfam16474
      Location:17 → 212
      KIND; Kinase non-catalytic C-lobe domain

    2. XM_028982052.1 → XP_028837885.1  protein spire homolog 1-like isoform X6

      UniProtKB/TrEMBL
      A0A8C4AV12
      Conserved Domains (2) summary
      cd15767
      Location:545 → 707
      FYVE_SPIR1; FYVE-related domain found in protein spire homolog 1 (Spire1) and similar proteins
      pfam16474
      Location:17 → 212
      KIND; Kinase non-catalytic C-lobe domain

    3. XM_028982049.1 → XP_028837882.1  protein spire homolog 1-like isoform X3

      UniProtKB/TrEMBL
      A0A8C4AV12
      Conserved Domains (2) summary
      cd15767
      Location:598 → 760
      FYVE_SPIR1; FYVE-related domain found in protein spire homolog 1 (Spire1) and similar proteins
      pfam16474
      Location:17 → 212
      KIND; Kinase non-catalytic C-lobe domain

    4. XM_028982047.1 → XP_028837880.1  protein spire homolog 1-like isoform X1

      UniProtKB/TrEMBL
      A0A8C4AV12, A0A8C4FWI4
      Related
      ENSDCDP00000029240.1, ENSDCDT00000038378.1
      Conserved Domains (2) summary
      cd15767
      Location:613 → 775
      FYVE_SPIR1; FYVE-related domain found in protein spire homolog 1 (Spire1) and similar proteins
      pfam16474
      Location:17 → 212
      KIND; Kinase non-catalytic C-lobe domain

    5. XM_028982051.1 → XP_028837884.1  protein spire homolog 1-like isoform X5

      UniProtKB/TrEMBL
      A0A8C4AV12
      Related
      ENSDCDP00000029237.1, ENSDCDT00000038375.1
      Conserved Domains (2) summary
      cd15767
      Location:546 → 708
      FYVE_SPIR1; FYVE-related domain found in protein spire homolog 1 (Spire1) and similar proteins
      pfam16474
      Location:17 → 212
      KIND; Kinase non-catalytic C-lobe domain

    6. XM_028982050.1 → XP_028837883.1  protein spire homolog 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8C4AV12, A0A8C4AVS8
      Related
      ENSDCDP00000029247.1, ENSDCDT00000038385.1
      Conserved Domains (2) summary
      cd15767
      Location:560 → 722
      FYVE_SPIR1; FYVE-related domain found in protein spire homolog 1 (Spire1) and similar proteins
      pfam16474
      Location:17 → 212
      KIND; Kinase non-catalytic C-lobe domain
    Nucleotide Protein
    Heading Accession and Version

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