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    CJI96_0002454 nuclear_transport_factor_2 [ [Candida] auris ]

    Gene ID: 40029145, updated on 1-Aug-2024

    Summary

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    Gene symbol
    CJI96_0002454
    Gene description
    nuclear_transport_factor_2
    Locus tag
    CJI96_0002454
    See related
    FungiDB:CJI96_0002454; VEuPathDB:CJI96_0002454
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    [Candida] auris (strain: B11220, nat-host: Homo sapiens, type-material: culture from type material of Candida auris)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Metschnikowiaceae; Metschnikowiaceae incertae sedis; Candida/Metschnikowiaceae
    Old locus tag
    CJI97_004000
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    Genomic context

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    See CJI96_0002454 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_072813.1 (2189450..2189975)

    Chromosome 2 - NC_072813.1Genomic Context describing neighboring genes Neighboring gene hypothetical_protein Neighboring gene transcription factor TFIIE subunit TFA2 Neighboring gene hypothetical_protein Neighboring gene U2-type spliceosomal complex subunit CWC21

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_072813.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species. Muñoz JF, et al. Nat Commun, 2018 Dec 17. PMID 30559369, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nuclear pore central transport channel IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear_transport_factor_2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_072813.1 Reference assembly

      Range
      2189450..2189975
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029035973.2 → XP_028891215.1  nuclear_transport_factor_2 [[Candida] auris]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2H0ZUE7
      Conserved Domains (1) summary
      cd00780
      Location:3 → 122
      NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
    Nucleotide Protein
    Heading Accession and Version

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