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    LOC103626458 leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [ Zea mays ]

    Gene ID: 103626458, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC103626458
    Gene description
    leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1
    Locus tag
    ZEAMMB73_Zm00001d014793
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    TD1; KIN5; ZmKIN5; GRMZM2G300133
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 5 NC_050100.1 (63488543..63492259)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 5 NC_024463.2 (63456843..63460156)

    Chromosome 5 - NC_050100.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100279926 Neighboring gene uncharacterized LOC100274819 Neighboring gene physical impedance induced protein 2 Neighboring gene uncharacterized LOC100273140

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. thick tassel dwarf1 encodes a putative maize ortholog of the Arabidopsis CLAVATA1 leucine-rich repeat receptor-like kinase. Bommert P, et al. Development, 2005 Mar. PMID 15716347

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables receptor serine/threonine kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1
    Names
    CLAVATA1-like protein
    CLV1 related kinase 5
    putative leucine-rich repeat receptor-like protein kinase family protein
    thick tassel dwarf1
    XP_008645089.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001397145.1 → NP_001384074.1  leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 precursor

      Status: INFERRED

      Source sequence(s)
      CABHLF010000004
      UniProtKB/Swiss-Prot
      P0DL10
      UniProtKB/TrEMBL
      A0A1Q0ZRS5, A0A3L6EG18, A0A4P8WA13, A0A8J8Y8L8
      Conserved Domains (2) summary
      PLN00113
      Location:45 → 925
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:130 → 180
      LRR_RI; leucine-rich repeat [structural motif]

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050100.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      63488543..63492259
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008646867.3 → XP_008645089.1  leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1

      UniProtKB/Swiss-Prot
      P0DL10
      UniProtKB/TrEMBL
      A0A1Q0ZRS5
      Conserved Domains (2) summary
      PLN00113
      Location:45 → 925
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:130 → 180
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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