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    PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 [ Felis catus (domestic cat) ]

    Gene ID: 100135766, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PAFAH1B1
    Official Full Name
    platelet activating factor acetylhydrolase 1b regulatory subunit 1
    Primary source
    VGNC:VGNC:68684
    See related
    EnsemblRapid:ENSFCTG00005030998
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Also known as
    LIS1; LIS-1
    Orthologs
    human mouse all
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    Genomic context

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    See PAFAH1B1 in Genome Data Viewer
    Location:
    chromosome: E1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E1 NC_058381.1 (14276762..14354030, complement)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E1 NC_018736.3 (14275294..14354450, complement)

    Chromosome E1 - NC_058381.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 92B Neighboring gene clustered mitochondria homolog Neighboring gene uncharacterized LOC123382087 Neighboring gene uncharacterized LOC123381995

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    platelet-activating factor acetylhydrolase IB subunit beta
    NP_001107812.1
    XP_006939996.1
    XP_019672433.1
    XP_023099168.1
    XP_044899911.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001114340.1 → NP_001107812.1  platelet-activating factor acetylhydrolase IB subunit beta

      See identical proteins and their annotated locations for NP_001107812.1

      Status: PROVISIONAL

      Source sequence(s)
      EU371400
      UniProtKB/Swiss-Prot
      B0LSW3
      UniProtKB/TrEMBL
      A0A2I2U4L0
      Related
      ENSFCTP00005058689.1, ENSFCTT00005086508.1
      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058381.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      14276762..14354030 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006939934.5 → XP_006939996.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X1

      See identical proteins and their annotated locations for XP_006939996.1

      UniProtKB/Swiss-Prot
      B0LSW3
      UniProtKB/TrEMBL
      A0A2I2U4L0
      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    2. XM_023243400.2 → XP_023099168.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X1

      UniProtKB/Swiss-Prot
      B0LSW3
      UniProtKB/TrEMBL
      A0A2I2U4L0
      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    3. XM_045043976.1 → XP_044899911.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X1

      UniProtKB/Swiss-Prot
      B0LSW3
      UniProtKB/TrEMBL
      A0A2I2U4L0
      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    4. XM_019816874.2 → XP_019672433.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X2

      UniProtKB/TrEMBL
      A0A2I2U4L0
      Conserved Domains (2) summary
      cd00200
      Location:66 → 370
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:73 → 110
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B0LSW3.1 GenPept UniProtKB/Swiss-Prot:B0LSW3

    Gene LinkOut

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