U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    EDI_100360 40S ribosomal protein S8, putative [ Entamoeba dispar SAW760 ]

    Gene ID: 5883924, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    EDI_100360
    Gene description
    40S ribosomal protein S8, putative
    Locus tag
    EDI_100360
    See related
    AmoebaDB:EDI_100360; VEuPathDB:EDI_100360
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Entamoeba dispar SAW760 (strain: SAW760)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See EDI_100360 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001854816.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Pescadillo, putative Neighboring gene uncharacterized protein Neighboring gene phosphatidylinositol kinase, putative

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_001854816.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    40S ribosomal protein S8, putative
    XP_001738825.1
    • encoded by transcript EDI_100360A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001854816.1 Reference assembly

      Range
      14673..15386 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001738773.1 → XP_001738825.1  40S ribosomal protein S8, putative [Entamoeba dispar SAW760]

      See identical proteins and their annotated locations for XP_001738825.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B0EK86
      Conserved Domains (2) summary
      cd11380
      Location:5 → 220
      Ribosomal_S8e_like; Eukaryotic/archaeal ribosomal protein S8e and similar proteins
      PTZ00148
      Location:1 → 237
      PTZ00148; 40S ribosomal protein S8; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials