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    LOC732808 Binding protein homolog 1 [ Zea mays ]

    Gene ID: 732808, updated on 25-Jan-2024

    Summary

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    Gene symbol
    LOC732808
    Gene description
    Binding protein homolog 1
    Locus tag
    ZEAMMB73_Zm00001d014993
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    b-70; bip1; BIPE2; GRMZM2G114793
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 5 NC_050100.1 (71318285..71322113, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 5 NC_024463.2 (71285813..71289641, complement)

    Chromosome 5 - NC_050100.1Genomic Context describing neighboring genes Neighboring gene Nucleic acid-binding OB-fold-like protein Neighboring gene uncharacterized LOC100279176 Neighboring gene uncharacterized LOC100274558 Neighboring gene uncharacterized LOC100282509

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of an immunoglobulin binding protein homolog in the maize floury-2 endosperm mutant. Fontes EB, et al. Plant Cell, 1991 May. PMID 1840923, Free PMC Article
    2. Comparative analysis of BiP gene expression in maize endosperm. Wrobel RL, et al. Gene, 1997 Dec 19. PMID 9434171
    3. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article
    4. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    5. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent protein folding chaperone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heat shock protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables misfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to unfolded protein IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chaperone cofactor-dependent protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum unfolded protein response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of endoplasmic reticulum chaperone complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum lumen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    luminal-binding protein 2
    Names
    B70
    BiP homolog1
    ER luminal binding protein
    NHP2-like protein 1
    Stress70er
    biP2
    binding protein-like protein
    cb70-1
    gsy249b(b70)
    heat shock protein 70 homolog 2
    lumenal binding protein cBiPe2
    ncr200b
    ncr200b(rip)
    polypeptide chain-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001291796.1 → NP_001278725.1  luminal-binding protein 2 precursor

      See identical proteins and their annotated locations for NP_001278725.1

      Status: PROVISIONAL

      Source sequence(s)
      BT041378
      UniProtKB/Swiss-Prot
      P24067
      UniProtKB/TrEMBL
      B4FW90, B4FWJ8

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050100.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      71318285..71322113 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001112423.1: Suppressed sequence

      Description
      NM_001112423.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.

    2. NM_001158931.1: Suppressed sequence

      Description
      NM_001158931.1: This RefSeq was suppressed because the instantiating accession is a chimera.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P24067.3 GenPept UniProtKB/Swiss-Prot:P24067

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