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    LOC115041572 high choriolytic enzyme 1-like [ Echeneis naucrates (live sharksucker) ]

    Gene ID: 115041572, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC115041572
    Gene description
    high choriolytic enzyme 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Echeneis naucrates
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Echeneidae; Echeneis
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    Genomic context

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    See LOC115041572 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current fEcheNa1.1 (GCF_900963305.1) 3 NC_042513.1 (16080199..16080984, complement)

    Chromosome 3 - NC_042513.1Genomic Context describing neighboring genes Neighboring gene solute carrier organic anion transporter family member 3A1-like Neighboring gene high choriolytic enzyme 1-like Neighboring gene high choriolytic enzyme 1-like Neighboring gene high choriolytic enzyme 1-like Neighboring gene high choriolytic enzyme 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_042513.1 Chromosome 3 Reference fEcheNa1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high choriolytic enzyme 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Echeneis naucrates Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fEcheNa1.1 Primary Assembly

    Genomic

    1. NC_042513.1 Reference fEcheNa1.1 Primary Assembly

      Range
      16080199..16080984 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029499122.1 → XP_029354982.1  high choriolytic enzyme 1-like

      UniProtKB/TrEMBL
      A0A665V6J9
      Conserved Domains (1) summary
      cd04283
      Location:79 → 261
      ZnMc_hatching_enzyme; Zinc-dependent metalloprotease, hatching enzyme-like subfamily. Hatching enzymes are secreted by teleost embryos to digest the egg envelope or chorion. In some teleosts, the hatching enzyme may be a system consisting of two evolutionary related ...
    Nucleotide Protein
    Heading Accession and Version

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