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    plekhg4 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [ Echeneis naucrates (live sharksucker) ]

    Gene ID: 115041600, updated on 17-Mar-2024

    Summary

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    Gene symbol
    plekhg4
    Gene description
    pleckstrin homology domain containing, family G (with RhoGef domain) member 4
    See related
    Ensembl:ENSENLG00000020234
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Echeneis naucrates
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Echeneidae; Echeneis
    Orthologs
    zebrafish all
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    Genomic context

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    See plekhg4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current fEcheNa1.1 (GCF_900963305.1) 3 NC_042513.1 (27715919..27737913)

    Chromosome 3 - NC_042513.1Genomic Context describing neighboring genes Neighboring gene formin homology 2 domain containing 1 Neighboring gene solute carrier family 9 member A5 Neighboring gene ras-related protein Rab-8B Neighboring gene isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial-like Neighboring gene calcium and integrin-binding family member 2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_042513.1 Chromosome 3 Reference fEcheNa1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC115041600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Echeneis naucrates Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fEcheNa1.1 Primary Assembly

    Genomic

    1. NC_042513.1 Reference fEcheNa1.1 Primary Assembly

      Range
      27715919..27737913
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029499162.1 → XP_029355022.1  uncharacterized protein LOC115041600 isoform X2

      Conserved Domains (4) summary
      cd13242
      Location:1672 → 1808
      PH_puratrophin-1; Puratrophin-1 pleckstrin homology (PH) domain
      cl02488
      Location:983 → 1208
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      pfam00621
      Location:1508 → 1651
      RhoGEF; RhoGEF domain
      cl15787
      Location:829 → 968
      SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

    2. XM_029499161.1 → XP_029355021.1  uncharacterized protein LOC115041600 isoform X1

      Conserved Domains (4) summary
      cd13242
      Location:1672 → 1808
      PH_puratrophin-1; Puratrophin-1 pleckstrin homology (PH) domain
      cl02488
      Location:983 → 1208
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      pfam00621
      Location:1508 → 1651
      RhoGEF; RhoGEF domain
      cl15787
      Location:829 → 968
      SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

    3. XM_029499163.1 → XP_029355023.1  uncharacterized protein LOC115041600 isoform X3

      Conserved Domains (4) summary
      cd13242
      Location:1672 → 1808
      PH_puratrophin-1; Puratrophin-1 pleckstrin homology (PH) domain
      cl02488
      Location:983 → 1208
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      pfam00621
      Location:1508 → 1651
      RhoGEF; RhoGEF domain
      cl15787
      Location:829 → 968
      SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

    4. XM_029499166.1 → XP_029355026.1  uncharacterized protein LOC115041600 isoform X4

      Related
      ENSENLT00000049075.1
      Conserved Domains (4) summary
      cd13242
      Location:1638 → 1774
      PH_puratrophin-1; Puratrophin-1 pleckstrin homology (PH) domain
      cl02488
      Location:949 → 1174
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      pfam00621
      Location:1474 → 1617
      RhoGEF; RhoGEF domain
      cl15787
      Location:795 → 934
      SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
    Nucleotide Protein
    Heading Accession and Version

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