U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    pde4d phosphodiesterase 4D, cAMP-specific [ Echeneis naucrates (live sharksucker) ]

    Gene ID: 115049458, updated on 12-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    pde4d
    Gene description
    phosphodiesterase 4D, cAMP-specific
    See related
    Ensembl:ENSENLG00000017104
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Echeneis naucrates
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Echeneidae; Echeneis
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See pde4d in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current fEcheNa1.1 (GCF_900963305.1) 9 NC_042519.1 (14245831..14389170, complement)

    Chromosome 9 - NC_042519.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115048281 Neighboring gene RAB3C, member RAS oncogene family Neighboring gene ELOVL fatty acid elongase 7a Neighboring gene excision repair cross-complementation group 8

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_042519.1 Chromosome 9 Reference fEcheNa1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3',5'-cyclic-AMP phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in perinuclear region of cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cAMP-specific 3',5'-cyclic phosphodiesterase 4D

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Echeneis naucrates Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fEcheNa1.1 Primary Assembly

    Genomic

    1. NC_042519.1 Reference fEcheNa1.1 Primary Assembly

      Range
      14245831..14389170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029511703.1 → XP_029367563.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X1

      UniProtKB/TrEMBL
      A0A665WQL2, A0A665WRB4
      Related
      ENSENLP00000046290.1, ENSENLT00000047423.1
      Conserved Domains (2) summary
      pfam00233
      Location:406 → 647
      PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
      pfam18100
      Location:166 → 283
      PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

    2. XM_029511705.1 → XP_029367565.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X2

      UniProtKB/TrEMBL
      A0A665WR99
      Related
      ENSENLP00000046511.1, ENSENLT00000047648.1
      Conserved Domains (2) summary
      pfam00233
      Location:411 → 652
      PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
      pfam18100
      Location:171 → 288
      PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

    3. XM_029511706.1 → XP_029367566.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X3

      UniProtKB/TrEMBL
      A0A665WR41
      Conserved Domains (2) summary
      pfam00233
      Location:399 → 640
      PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
      pfam18100
      Location:159 → 276
      PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

    4. XM_029511707.1 → XP_029367567.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X4

      UniProtKB/TrEMBL
      A0A665WR50
      Related
      ENSENLP00000046524.1, ENSENLT00000047661.1
      Conserved Domains (2) summary
      pfam00233
      Location:354 → 595
      PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
      pfam18100
      Location:114 → 231
      PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

    5. XM_029511709.1 → XP_029367569.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X6

      Conserved Domains (2) summary
      pfam00233
      Location:171 → 412
      PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
      pfam18100
      Location:16 → 48
      PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

    6. XM_029511708.1 → XP_029367568.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X5

      UniProtKB/TrEMBL
      A0A665WR41, A0A665WR93
      Related
      ENSENLP00000046538.1, ENSENLT00000047675.1
      Conserved Domains (2) summary
      pfam00233
      Location:339 → 580
      PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
      pfam18100
      Location:99 → 216
      PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.