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    ALG13 ALG13 UDP-N-acetylglucosaminyltransferase subunit [ Rhinatrema bivittatum (two-lined caecilian) ]

    Gene ID: 115094724, updated on 17-Mar-2024

    Summary

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    Gene symbol
    ALG13
    Gene description
    ALG13 UDP-N-acetylglucosaminyltransferase subunit
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhinatrema bivittatum
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
    Orthologs
    human mouse all
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    Genomic context

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    See ALG13 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    100 current aRhiBiv1.1 (GCF_901001135.1) 6 NC_042620.1 (327302701..327418922)

    Chromosome 6 - NC_042620.1Genomic Context describing neighboring genes Neighboring gene doublecortin Neighboring gene serine rich and transmembrane domain containing 2 Neighboring gene angiomotin Neighboring gene phosphoglycerate kinase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_042620.1 Chromosome 6 Reference aRhiBiv1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hexosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dolichol-linked oligosaccharide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aRhiBiv1.1 Primary Assembly

    Genomic

    1. NC_042620.1 Reference aRhiBiv1.1 Primary Assembly

      Range
      327302701..327418922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029607981.1 → XP_029463841.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13

      Conserved Domains (3) summary
      cd04508
      Location:515 → 563
      TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
      cl10013
      Location:5 → 147
      Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
      cl19932
      Location:253 → 332
      OTU; OTU-like cysteine protease
    Nucleotide Protein
    Heading Accession and Version

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