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    nrcama neuronal cell adhesion molecule a [ Salarias fasciatus (jewelled blenny) ]

    Gene ID: 115404736, updated on 17-Mar-2024

    Summary

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    Gene symbol
    nrcama
    Gene description
    neuronal cell adhesion molecule a
    See related
    Ensembl:ENSSFAG00005024742
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salarias fasciatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Blenniimorphae; Blenniiformes; Blennioidei; Blenniidae; Salariinae; Salarias
    Orthologs
    human zebrafish all
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    Genomic context

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    See nrcama in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    100 current fSalaFa1.1 (GCF_902148845.1) 17 NC_043761.1 (10444094..10485084)

    Chromosome 17 - NC_043761.1Genomic Context describing neighboring genes Neighboring gene arginine vasopressin receptor 2, like Neighboring gene patatin-like phospholipase domain containing 8 Neighboring gene A-kinase anchoring protein 14 Neighboring gene contactin 1b Neighboring gene PDZ domain containing ring finger 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_043761.1 Chromosome 17 Reference fSalaFa1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell-cell adhesion mediator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neuronal cell adhesion molecule-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salarias fasciatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSalaFa1.1 Primary Assembly

    Genomic

    1. NC_043761.1 Reference fSalaFa1.1 Primary Assembly

      Range
      10444094..10485084
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030114123.1 → XP_029969983.1  neuronal cell adhesion molecule-like isoform X1

      UniProtKB/TrEMBL
      A0A672JQ08
      Related
      ENSSFAP00005054975.1, ENSSFAT00005056664.1
      Conserved Domains (5) summary
      smart00060
      Location:1073 → 1138
      FN3; Fibronectin type 3 domain
      smart00409
      Location:528 → 609
      IG; Immunoglobulin
      cd00063
      Location:623 → 713
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam13882
      Location:1189 → 1277
      Bravo_FIGEY; Bravo-like intracellular region
      cl11960
      Location:60 → 135
      Ig; Immunoglobulin domain

    2. XM_030114124.1 → XP_029969984.1  neuronal cell adhesion molecule-like isoform X2

      UniProtKB/TrEMBL
      A0A672JL56
      Conserved Domains (4) summary
      smart00410
      Location:528 → 609
      IG_like; Immunoglobulin like
      cd00063
      Location:613 → 703
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam13882
      Location:1053 → 1137
      Bravo_FIGEY; Bravo-like intracellular region
      cl11960
      Location:60 → 135
      Ig; Immunoglobulin domain

    3. XM_030114125.1 → XP_029969985.1  neuronal cell adhesion molecule-like isoform X3

      UniProtKB/TrEMBL
      A0A672JL56
      Related
      ENSSFAP00005055018.1, ENSSFAT00005056707.1
      Conserved Domains (4) summary
      smart00410
      Location:522 → 603
      IG_like; Immunoglobulin like
      cd00063
      Location:607 → 697
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam13882
      Location:1047 → 1131
      Bravo_FIGEY; Bravo-like intracellular region
      cl11960
      Location:54 → 129
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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