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    LOC115417401 ICOS ligand-like [ Sphaeramia orbicularis (orbiculate cardinalfish) ]

    Gene ID: 115417401, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC115417401
    Gene description
    ICOS ligand-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sphaeramia orbicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Kurtiformes; Apogonoidei; Apogonidae; Apogoninae; Sphaeramia
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    Genomic context

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    See LOC115417401 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current fSphaOr1.1 (GCF_902148855.1) 4 NC_043960.1 (34690479..34698614, complement)

    Chromosome 4 - NC_043960.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family, member 23 Neighboring gene nitrilase family, member 2 Neighboring gene GTP binding protein 6 (putative) Neighboring gene PI-PLC X domain-containing protein 1-like Neighboring gene transfer RNA threonine (anticodon AGU)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_043960.1 Chromosome 4 Reference fSphaOr1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in T cell costimulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ICOS ligand-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sphaeramia orbicularis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSphaOr1.1

    Genomic

    1. NC_043960.1 Reference fSphaOr1.1

      Range
      34690479..34698614 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030131303.1 → XP_029987163.1  ICOS ligand-like isoform X2

      Conserved Domains (1) summary
      cl11960
      Location:152 → 222
      Ig; Immunoglobulin domain

    2. XM_030131304.1 → XP_029987164.1  ICOS ligand-like isoform X2

      Conserved Domains (1) summary
      cl11960
      Location:152 → 222
      Ig; Immunoglobulin domain

    3. XM_030131302.1 → XP_029987162.1  ICOS ligand-like isoform X1

      Conserved Domains (1) summary
      cl11960
      Location:159 → 229
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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