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    MYO9B myosin IXB [ Calypte anna (Anna's hummingbird) ]

    Gene ID: 103534941, updated on 3-Aug-2024

    Summary

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    Gene symbol
    MYO9B
    Gene description
    myosin IXB
    See related
    EnsemblRapid:ENSCAAG00010008515
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Calypte anna
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Calypte
    Orthologs
    human mouse all
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    Genomic context

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    See MYO9B in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    42
    Annotation release Status Assembly Chr Location
    101 current bCalAnn1_v1.p (GCF_003957555.1) 28 NC_044273.1 (4015476..4056179, complement)
    100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007621507.1 (1493189..1525118, complement)

    Chromosome 28 - NC_044273.1Genomic Context describing neighboring genes Neighboring gene insulin receptor Neighboring gene unconventional SNARE in the ER 1 Neighboring gene HAUS augmin like complex subunit 8 Neighboring gene C3 and PZP like alpha-2-macroglobulin domain containing 8 Neighboring gene F2R like thrombin or trypsin receptor 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microfilament motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Rho protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament-based movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    unconventional myosin-IXb

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bCalAnn1_v1.p

    Genomic

    1. NC_044273.1 Reference bCalAnn1_v1.p

      Range
      4015476..4056179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030466164.1 → XP_030322024.1  unconventional myosin-IXb isoform X3

      Related
      ENSCAAP00010011786.1, ENSCAAT00010012419.1
      Conserved Domains (6) summary
      smart00015
      Location:994 → 1013
      IQ; Calmodulin-binding motif
      cd00029
      Location:1648 → 1696
      C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
      cd04407
      Location:1712 → 1897
      RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
      cd01385
      Location:159 → 935
      MYSc_Myo9; class IX myosin, motor domain
      pfam01271
      Location:1033 → 1357
      Granin; Granin (chromogranin or secretogranin)
      cd17217
      Location:16 → 111
      RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

    2. XM_030466163.1 → XP_030322023.1  unconventional myosin-IXb isoform X2

      Conserved Domains (6) summary
      smart00015
      Location:1024 → 1043
      IQ; Calmodulin-binding motif
      cd00029
      Location:1678 → 1726
      C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
      cd04407
      Location:1742 → 1927
      RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
      cd01385
      Location:159 → 965
      MYSc_Myo9; class IX myosin, motor domain
      pfam01271
      Location:1063 → 1387
      Granin; Granin (chromogranin or secretogranin)
      cd17217
      Location:16 → 111
      RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

    3. XM_030466162.1 → XP_030322022.1  unconventional myosin-IXb isoform X1

      Related
      ENSCAAP00010011760.1, ENSCAAT00010012391.1
      Conserved Domains (6) summary
      smart00015
      Location:1024 → 1043
      IQ; Calmodulin-binding motif
      cd00029
      Location:1678 → 1726
      C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
      cd04407
      Location:1742 → 1927
      RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
      cd01385
      Location:159 → 965
      MYSc_Myo9; class IX myosin, motor domain
      pfam01271
      Location:1063 → 1387
      Granin; Granin (chromogranin or secretogranin)
      cd17217
      Location:16 → 111
      RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

    4. XM_030466165.1 → XP_030322025.1  unconventional myosin-IXb isoform X4

      Conserved Domains (6) summary
      smart00015
      Location:1024 → 1043
      IQ; Calmodulin-binding motif
      cd00029
      Location:1678 → 1726
      C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
      cd04407
      Location:1742 → 1927
      RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
      cd01385
      Location:159 → 965
      MYSc_Myo9; class IX myosin, motor domain
      pfam01271
      Location:1063 → 1387
      Granin; Granin (chromogranin or secretogranin)
      cd17217
      Location:16 → 111
      RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb
    Nucleotide Protein
    Heading Accession and Version

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