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    GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 [ Gorilla gorilla gorilla (western lowland gorilla) ]

    Gene ID: 101143576, updated on 1-Oct-2024

    Summary

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    Gene symbol
    GGA2
    Gene description
    golgi associated, gamma adaptin ear containing, ARF binding protein 2
    See related
    Ensembl:ENSGGOG00000004218
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gorilla gorilla gorilla (sub-species: gorilla)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
    Orthologs
    human mouse all
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    Genomic context

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    See GGA2 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 18 NC_073242.2 (23117942..23162542, complement)
    RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 16 NC_073240.1 (24137837..24184170, complement)

    Chromosome 18 - NC_073242.2Genomic Context describing neighboring genes Neighboring gene double C2-like domain-containing protein alpha Neighboring gene ceramide synthase-like Neighboring gene uncharacterized LOC115931114 Neighboring gene glutamyl-tRNA synthetase 2, mitochondrial Neighboring gene ubiquitin family domain containing 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit AB1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor-binding protein GGA2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073242.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

      Range
      23117942..23162542 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019011902.4 → XP_018867447.2  ADP-ribosylation factor-binding protein GGA2

      UniProtKB/TrEMBL
      G3SFF9
      Conserved Domains (4) summary
      smart00809
      Location:494 → 608
      Alpha_adaptinC2; Adaptin C-terminal domain
      cd14239
      Location:230 → 318
      GAT_GGA1_GGA2; GAT domain found in ADP-ribosylation factor (Arf)-binding proteins GGA1 and GGA2
      cd17010
      Location:28 → 166
      VHS_GGA2; VHS (Vps27/Hrs/STAM) domain of ADP-ribosylation factor-binding protein GGA2
      pfam18308
      Location:188 → 227
      GGA_N-GAT; GGA N-GAT domain
    Nucleotide Protein
    Heading Accession and Version

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