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    tex11 testis expressed 11 [ Sander lucioperca (pikeperch) ]

    Gene ID: 116052337, updated on 21-Aug-2024

    Summary

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    Gene symbol
    tex11
    Gene description
    testis expressed 11
    See related
    EnsemblRapid:ENSSLUG00000013330
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sander lucioperca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Sander
    Orthologs
    human zebrafish all
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    Genomic context

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    See tex11 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    101 current SLUC_FBN_1.2 (GCF_008315115.2) 1 NC_050173.1 (29999450..30009551, complement)
    100 previous assembly SLUC_FBN_1 (GCF_008315115.1) Unplaced Scaffold NW_022172812.1 (5439874..5449973, complement)

    Chromosome 1 - NC_050173.1Genomic Context describing neighboring genes Neighboring gene glycerophosphodiester phosphodiesterase domain containing 2 Neighboring gene discs, large homolog 3 (Drosophila) Neighboring gene uncharacterized LOC116052346 Neighboring gene uncharacterized LOC116052519 Neighboring gene kinase insert domain receptor like Neighboring gene caudal type homeobox 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in meiotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    testis-expressed protein 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sander lucioperca Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SLUC_FBN_1.2 Primary Assembly

    Genomic

    1. NC_050173.1 Reference SLUC_FBN_1.2 Primary Assembly

      Range
      29999450..30009551 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031302947.1 → XP_031158807.1  testis-expressed protein 11 isoform X1

      UniProtKB/TrEMBL
      A0A8C9YWA5
      Related
      ENSSLUP00000029689.1, ENSSLUT00000030633.2
      Conserved Domains (4) summary
      TIGR02917
      Location:424 → 599
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:400 → 431
      TPR; TPR repeat [structural motif]
      pfam08631
      Location:169 → 424
      SPO22; Meiosis protein SPO22/ZIP4 like
      cl00299
      Location:403 → 465
      MIT; domain contained within Microtubule Interacting and Trafficking molecules. The MIT domain is found in sorting nexins, the nuclear thiol protease PalBH, the AAA protein spastin and archaebacterial proteins with similar domain architecture, vacuolar ...

    2. XM_036001746.1 → XP_035857639.1  testis-expressed protein 11 isoform X3

      Conserved Domains (4) summary
      TIGR02917
      Location:322 → 497
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:298 → 329
      TPR; TPR repeat [structural motif]
      pfam08631
      Location:67 → 322
      SPO22; Meiosis protein SPO22/ZIP4 like
      cl00299
      Location:301 → 363
      MIT; domain contained within Microtubule Interacting and Trafficking molecules. The MIT domain is found in sorting nexins, the nuclear thiol protease PalBH, the AAA protein spastin and archaebacterial proteins with similar domain architecture, vacuolar ...

    3. XM_031302949.2 → XP_031158809.1  testis-expressed protein 11 isoform X3

      Conserved Domains (4) summary
      TIGR02917
      Location:322 → 497
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:298 → 329
      TPR; TPR repeat [structural motif]
      pfam08631
      Location:67 → 322
      SPO22; Meiosis protein SPO22/ZIP4 like
      cl00299
      Location:301 → 363
      MIT; domain contained within Microtubule Interacting and Trafficking molecules. The MIT domain is found in sorting nexins, the nuclear thiol protease PalBH, the AAA protein spastin and archaebacterial proteins with similar domain architecture, vacuolar ...

    4. XM_031302948.2 → XP_031158808.1  testis-expressed protein 11 isoform X2

      Related
      ENSSLUP00000071652.1, ENSSLUT00000085038.1
      Conserved Domains (4) summary
      TIGR02917
      Location:424 → 599
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:400 → 431
      TPR; TPR repeat [structural motif]
      pfam08631
      Location:169 → 424
      SPO22; Meiosis protein SPO22/ZIP4 like
      cl00299
      Location:403 → 465
      MIT; domain contained within Microtubule Interacting and Trafficking molecules. The MIT domain is found in sorting nexins, the nuclear thiol protease PalBH, the AAA protein spastin and archaebacterial proteins with similar domain architecture, vacuolar ...
    Nucleotide Protein
    Heading Accession and Version

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