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    LYPLA2 lysophospholipase 2 [ Phoca vitulina (harbor seal) ]

    Gene ID: 116623846, updated on 18-Mar-2024

    Summary

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    Gene symbol
    LYPLA2
    Gene description
    lysophospholipase 2
    See related
    EnsemblRapid:ENSPVHG00000013390
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Phoca vitulina
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phoca
    Orthologs
    human mouse all
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    Genomic context

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    See LYPLA2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current GSC_HSeal_1.0 (GCF_004348235.1) Unplaced Scaffold NW_022589705.1 (83602345..83608767, complement)

    NW_022589705.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase Neighboring gene UDP-galactose-4-epimerase Neighboring gene PITH domain containing 1 Neighboring gene elongin A Neighboring gene U4 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022589705 Unplaced Scaffold Reference GSC_HSeal_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carboxylic ester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables palmitoyl-(protein) hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein depalmitoylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acyl-protein thioesterase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Phoca vitulina Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GSC_HSeal_1.0 Primary Assembly

    Genomic

    1. NW_022589705.1 Reference GSC_HSeal_1.0 Primary Assembly

      Range
      83602345..83608767 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032391348.1 → XP_032247239.1  acyl-protein thioesterase 2 isoform X1

      Conserved Domains (1) summary
      pfam02230
      Location:119 → 342
      Abhydrolase_2; Phospholipase/Carboxylesterase

    2. XM_032391360.1 → XP_032247251.1  acyl-protein thioesterase 2 isoform X3

      Related
      ENSPVHP00000016767.1, ENSPVHT00000018872.1
      Conserved Domains (1) summary
      pfam02230
      Location:11 → 234
      Abhydrolase_2; Phospholipase/Carboxylesterase

    3. XM_032391356.1 → XP_032247247.1  acyl-protein thioesterase 2 isoform X2

      Conserved Domains (1) summary
      pfam02230
      Location:119 → 336
      Abhydrolase_2; Phospholipase/Carboxylesterase
    Nucleotide Protein
    Heading Accession and Version

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