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    DLGAP4 DLG associated protein 4 [ Chiroxiphia lanceolata (lance-tailed manakin) ]

    Gene ID: 116795574, updated on 3-Aug-2024

    Summary

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    Gene symbol
    DLGAP4
    Gene description
    DLG associated protein 4
    See related
    EnsemblRapid:ENSCLNG00000008100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chiroxiphia lanceolata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Chiroxiphia
    Orthologs
    human mouse all
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    Genomic context

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    See DLGAP4 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current bChiLan1.pri (GCF_009829145.1) 17 NC_045653.1 (261572..411274)

    Chromosome 17 - NC_045653.1Genomic Context describing neighboring genes Neighboring gene erythrocyte membrane protein band 4.1 like 1 Neighboring gene AAR2 splicing factor Neighboring gene TGFB induced factor homeobox 2 Neighboring gene myosin light chain 9

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045653.1 Chromosome 17 Reference bChiLan1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of postsynaptic neurotransmitter receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in glutamatergic synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic specialization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    disks large-associated protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chiroxiphia lanceolata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bChiLan1.pri

    Genomic

    1. NC_045653.1 Reference bChiLan1.pri

      Range
      261572..411274
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032705340.1 → XP_032561231.1  disks large-associated protein 4 isoform X1

      Conserved Domains (1) summary
      pfam03359
      Location:694 → 1022
      GKAP; Guanylate-kinase-associated protein (GKAP) protein

    2. XM_032705341.1 → XP_032561232.1  disks large-associated protein 4 isoform X2

      Conserved Domains (1) summary
      pfam03359
      Location:677 → 1005
      GKAP; Guanylate-kinase-associated protein (GKAP) protein

    3. XM_032705342.1 → XP_032561233.1  disks large-associated protein 4 isoform X3

      Conserved Domains (1) summary
      pfam03359
      Location:656 → 984
      GKAP; Guanylate-kinase-associated protein (GKAP) protein

    4. XM_032705343.1 → XP_032561234.1  disks large-associated protein 4 isoform X4

      Related
      ENSCLNP00000011564.1, ENSCLNT00000012229.1
      Conserved Domains (1) summary
      pfam03359
      Location:639 → 967
      GKAP; Guanylate-kinase-associated protein (GKAP) protein

    5. XM_032705344.1 → XP_032561235.1  disks large-associated protein 4 isoform X5

      Related
      ENSCLNP00000011577.1, ENSCLNT00000012243.1
      Conserved Domains (1) summary
      pfam03359
      Location:638 → 966
      GKAP; Guanylate-kinase-associated protein (GKAP) protein

    6. XM_032705345.1 → XP_032561236.1  disks large-associated protein 4 isoform X6

      Conserved Domains (1) summary
      pfam03359
      Location:299 → 627
      GKAP; Guanylate-kinase-associated protein (GKAP) protein

    7. XM_032705347.1 → XP_032561238.1  disks large-associated protein 4 isoform X8

      Conserved Domains (1) summary
      pfam03359
      Location:1 → 281
      GKAP; Guanylate-kinase-associated protein (GKAP) protein

    8. XM_032705346.1 → XP_032561237.1  disks large-associated protein 4 isoform X7

      Related
      ENSCLNP00000011597.1, ENSCLNT00000012264.1
      Conserved Domains (1) summary
      pfam03359
      Location:121 → 449
      GKAP; Guanylate-kinase-associated protein (GKAP) protein

    9. XM_032705349.1 → XP_032561240.1  disks large-associated protein 4 isoform X8

      Conserved Domains (1) summary
      pfam03359
      Location:1 → 281
      GKAP; Guanylate-kinase-associated protein (GKAP) protein
    Nucleotide Protein
    Heading Accession and Version

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