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    LOC117309564 somatotropin [ Tursiops truncatus (common bottlenose dolphin) ]

    Gene ID: 117309564, updated on 20-Nov-2023

    Summary

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    Gene symbol
    LOC117309564
    Gene description
    somatotropin
    See related
    EnsemblRapid:ENSTTRG00000028837
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tursiops truncatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
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    Genomic context

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    See LOC117309564 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current mTurTru1.mat.Y (GCF_011762595.1) 20 NC_047053.1 (43938624..43946359, complement)

    Chromosome 20 - NC_047053.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit D2 Neighboring gene intercellular adhesion molecule 5 Neighboring gene uncharacterized LOC117309519 Neighboring gene CD79b molecule Neighboring gene sodium voltage-gated channel alpha subunit 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_047053.1 Chromosome 20 Reference mTurTru1.mat.Y Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables growth hormone receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in growth hormone receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of growth IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of receptor signaling pathway via JAK-STAT IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of tyrosine phosphorylation of STAT protein IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to nutrient levels IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    somatotropin
    Names
    growth hormone

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mTurTru1.mat.Y Primary Assembly

    Genomic

    1. NC_047053.1 Reference mTurTru1.mat.Y Primary Assembly

      Range
      43938624..43946359 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033847701.1 → XP_033703592.1  somatotropin

      UniProtKB/TrEMBL
      A0A3S6P8E9, A0A6J3QMX0
      Conserved Domains (1) summary
      cd10285
      Location:81 → 260
      somatotropin_like; Somatotropin or growth hormone (GH), placental lactogen, and related pituitary gland hormones

    2. XM_033847700.1 → XP_033703591.1  somatotropin

      UniProtKB/TrEMBL
      A0A3S6P8E9, A0A6J3QMX0
      Related
      ENSTTRP00000020330.1, ENSTTRT00000027508.1
      Conserved Domains (1) summary
      cd10285
      Location:81 → 260
      somatotropin_like; Somatotropin or growth hormone (GH), placental lactogen, and related pituitary gland hormones
    Nucleotide Protein
    Heading Accession and Version

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