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    LOC117331267 copine-8-like [ Pecten maximus ]

    Gene ID: 117331267, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC117331267
    Gene description
    copine-8-like
    See related
    EnsemblRapid:LOC117331267
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pecten maximus
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Pecten
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    Genomic context

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    See LOC117331267 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current xPecMax1.1 (GCF_902652985.1) 7 NC_047021.1 (379601..442164, complement)

    Chromosome 7 - NC_047021.1Genomic Context describing neighboring genes Neighboring gene betaine--homocysteine S-methyltransferase 1-like Neighboring gene uncharacterized LOC117331265 Neighboring gene uncharacterized LOC117331268 Neighboring gene S-antigen protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_047021.1 Chromosome 7 Reference xPecMax1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    copine-8-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pecten maximus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference xPecMax1.1

    Genomic

    1. NC_047021.1 Reference xPecMax1.1

      Range
      379601..442164 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033889872.1 → XP_033745763.1  copine-8-like isoform X7

      Related
      XP_033745763.1, XM_033889872.1
      Conserved Domains (3) summary
      cd04047
      Location:154 → 265
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:21 → 136
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:275 → 533
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    2. XM_033889868.1 → XP_033745759.1  copine-8-like isoform X4

      Related
      XP_033745759.1, XM_033889868.1
      Conserved Domains (3) summary
      cd04047
      Location:154 → 270
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:21 → 136
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:280 → 538
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    3. XM_033889866.1 → XP_033745757.1  copine-8-like isoform X2

      Related
      XP_033745757.1, XM_033889866.1
      Conserved Domains (3) summary
      cd04047
      Location:154 → 270
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:21 → 136
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:280 → 539
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    4. XM_033889871.1 → XP_033745762.1  copine-8-like isoform X6

      Related
      XP_033745762.1, XM_033889871.1
      Conserved Domains (3) summary
      cd04047
      Location:154 → 265
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:21 → 136
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:275 → 533
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    5. XM_033889869.1 → XP_033745760.1  copine-8-like isoform X5

      Related
      XP_033745760.1, XM_033889869.1
      Conserved Domains (3) summary
      cd04047
      Location:154 → 265
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:21 → 136
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:275 → 534
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    6. XM_033889867.1 → XP_033745758.1  copine-8-like isoform X3

      Related
      XP_033745758.1, XM_033889867.1
      Conserved Domains (3) summary
      cd04047
      Location:154 → 270
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:21 → 136
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:280 → 538
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    7. XM_033889865.1 → XP_033745756.1  copine-8-like isoform X1

      Related
      XP_033745756.1, XM_033889865.1
      Conserved Domains (3) summary
      cd04047
      Location:154 → 270
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:21 → 136
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:280 → 539
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...
    Nucleotide Protein
    Heading Accession and Version

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