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    LOC117468220 endophilin-B2-like [ Pseudochaenichthys georgianus (South Georgia icefish) ]

    Gene ID: 117468220, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC117468220
    Gene description
    endophilin-B2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pseudochaenichthys georgianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys
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    Genomic context

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    See LOC117468220 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current fPseGeo1.1 (GCF_902827115.1) 22 NC_047524.1 (2860313..2869011)

    Chromosome 22 - NC_047524.1Genomic Context describing neighboring genes Neighboring gene plastin-1-like Neighboring gene ATR serine/threonine kinase Neighboring gene uncharacterized LOC117467977 Neighboring gene uncharacterized LOC117468027

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_047524.1 Chromosome 22 Reference fPseGeo1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endophilin-B1-like; endophilin-B2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pseudochaenichthys georgianus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fPseGeo1.1

    Genomic

    1. NC_047524.1 Reference fPseGeo1.1

      Range
      2860313..2869011
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034112264.1 → XP_033968155.1  endophilin-B2-like isoform X2

      Conserved Domains (1) summary
      cl12013
      Location:19 → 254
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    2. XM_034112263.1 → XP_033968154.1  endophilin-B1-like isoform X1

      Conserved Domains (2) summary
      NF033609
      Location:334 → 496
      MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
      cl12013
      Location:19 → 283
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    Nucleotide Protein
    Heading Accession and Version

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