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    Vps26 vacuolar protein sorting 26 [ Drosophila albomicans ]

    Gene ID: 117573580, updated on 23-May-2024

    Summary

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    Gene symbol
    Vps26
    Gene description
    vacuolar protein sorting 26
    See related
    EnsemblRapid:LOC117573580
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila albomicans
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Orthologs
    fruit fly all
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    Genomic context

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    See Vps26 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current ASM965048v2 (GCF_009650485.2) X NC_047627.2 (5332838..5335714)
    100 previous assembly drosAlbom15112-1751.03v1 (GCF_009650485.1) X NC_047627.1 (28044086..28046390, complement)

    Chromosome X - NC_047627.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127565617 Neighboring gene apoptosis-inducing factor 3-like Neighboring gene uncharacterized LOC127565143 Neighboring gene uncharacterized LOC117571495 Neighboring gene ribosomal protein 63, mitochondrial Neighboring gene required for meiotic nuclear division protein 1 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde transport, endosome to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of retromer complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila albomicans Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM965048v2

    Genomic

    1. NC_047627.2 Reference ASM965048v2

      Range
      5332838..5335714
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034256871.2 → XP_034112762.1  vacuolar protein sorting-associated protein 26

      UniProtKB/TrEMBL
      A0A6P8Z8M6
      Related
      XP_034112762.1, XM_034256871.2
      Conserved Domains (1) summary
      pfam03643
      Location:6 → 281
      Vps26; Vacuolar protein sorting-associated protein 26
    Nucleotide Protein Strain
    Heading Accession and Version

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