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    LMO2 LIM domain only 2 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100481333, updated on 8-Mar-2024

    Summary

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    Gene symbol
    LMO2
    Gene description
    LIM domain only 2
    Locus tag
    PANDA_005865
    See related
    Ensembl:ENSAMEG00000024401
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    human mouse all
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    Genomic context

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    See LMO2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 16 NC_048233.1 (64328981..64350641, complement)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217489.1 (2123384..2133628, complement)

    Chromosome 16 - NC_048233.1Genomic Context describing neighboring genes Neighboring gene F-box protein 3 Neighboring gene uncharacterized LOC117796796 Neighboring gene uncharacterized LOC105238236 Neighboring gene cell cycle associated protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rhombotin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048233.1 Reference ASM200744v2 Primary Assembly

      Range
      64328981..64350641 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034644641.1 → XP_034500532.1  rhombotin-2 isoform X3

      UniProtKB/TrEMBL
      D2H6Y8
      Conserved Domains (2) summary
      cd09384
      Location:30 → 85
      LIM1_LMO2; The first LIM domain of LMO2 (LIM domain only protein 2)
      cd09385
      Location:94 → 149
      LIM2_LMO2; The second LIM domain of LMO2 (LIM domain only protein 2)

    2. XM_034644639.1 → XP_034500530.1  rhombotin-2 isoform X1

      UniProtKB/TrEMBL
      A0A7N5P242
      Related
      ENSAMEP00000024465.1, ENSAMET00000035529.1

    3. XM_034644640.1 → XP_034500531.1  rhombotin-2 isoform X2

      UniProtKB/TrEMBL
      A0A7N5P590
      Related
      ENSAMEP00000034138.1, ENSAMET00000029994.1
    Nucleotide Protein
    Heading Accession and Version

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