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    L3MBTL1 L3MBTL histone methyl-lysine binding protein 1 [ Oxyura jamaicensis (ruddy duck) ]

    Gene ID: 118176646, updated on 20-Mar-2024

    Summary

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    Gene symbol
    L3MBTL1
    Gene description
    L3MBTL histone methyl-lysine binding protein 1
    See related
    EnsemblRapid:ENSOJMG00000009270
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oxyura jamaicensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Oxyura
    Orthologs
    human mouse all
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    Genomic context

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    See L3MBTL1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current BPBGC_Ojam_1.0 (GCF_011077185.1) 20 NC_048912.1 (141092..159616, complement)

    Chromosome 20 - NC_048912.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118176505 Neighboring gene dynein light chain roadblock-type 1 Neighboring gene microtubule associated protein 1 light chain 3 alpha Neighboring gene uncharacterized LOC118176648 Neighboring gene serine and arginine rich splicing factor 6 Neighboring gene erythrocyte membrane protein band 4.1 like 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_048912.1 Chromosome 20 Reference BPBGC_Ojam_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lethal(3)malignant brain tumor-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oxyura jamaicensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BPBGC_Ojam_1.0

    Genomic

    1. NC_048912.1 Reference BPBGC_Ojam_1.0

      Range
      141092..159616 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035343745.1 → XP_035199636.1  lethal(3)malignant brain tumor-like protein 1 isoform X2

      Related
      ENSOJMP00000014879.1, ENSOJMT00000015398.1
      Conserved Domains (3) summary
      cd09582
      Location:768 → 833
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:514 → 606
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam01530
      Location:642 → 670
      zf-C2HC; Zinc finger, C2HC type

    2. XM_035343744.1 → XP_035199635.1  lethal(3)malignant brain tumor-like protein 1 isoform X1

      Conserved Domains (3) summary
      cd09582
      Location:771 → 836
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:517 → 609
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam01530
      Location:645 → 673
      zf-C2HC; Zinc finger, C2HC type
    Nucleotide Protein
    Heading Accession and Version

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