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    ZSCAN29 zinc finger and SCAN domain containing 29 [ Myotis myotis ]

    Gene ID: 118650804, updated on 30-Mar-2024

    Summary

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    Gene symbol
    ZSCAN29
    Gene description
    zinc finger and SCAN domain containing 29
    Locus tag
    mMyoMyo1_021263
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Myotis myotis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
    Orthologs
    human mouse all
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    Genomic context

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    See ZSCAN29 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current mMyoMyo1.p (GCF_014108235.1) Unplaced Scaffold NW_023416313.1 (161594672..161607038, complement)

    NW_023416313.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118664488 Neighboring gene leucine carboxyl methyltransferase 2 Neighboring gene adenosine deaminase like Neighboring gene tubulin gamma complex component 4 Neighboring gene tumor protein p53 binding protein 1 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023416313 Unplaced Scaffold Reference mMyoMyo1.p Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and SCAN domain-containing protein 29

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Myotis myotis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMyoMyo1.p Primary Assembly

    Genomic

    1. NW_023416313.1 Reference mMyoMyo1.p Primary Assembly

      Range
      161594672..161607038 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036299182.1 → XP_036155075.1  zinc finger and SCAN domain-containing protein 29 isoform X1

      UniProtKB/TrEMBL
      A0A7J8AT31, A0A7J8ATX4
      Conserved Domains (4) summary
      smart00431
      Location:13 → 123
      SCAN; leucine rich region
      COG5048
      Location:675 → 835
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:679 → 699
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13837
      Location:406 → 487
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    2. XM_036299192.1 → XP_036155085.1  zinc finger and SCAN domain-containing protein 29 isoform X1

      UniProtKB/TrEMBL
      A0A7J8AT31, A0A7J8ATX4
      Conserved Domains (4) summary
      smart00431
      Location:13 → 123
      SCAN; leucine rich region
      COG5048
      Location:675 → 835
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:679 → 699
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13837
      Location:406 → 487
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    3. XM_036299201.1 → XP_036155094.1  zinc finger and SCAN domain-containing protein 29 isoform X2

      Conserved Domains (3) summary
      COG5048
      Location:629 → 789
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:633 → 653
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13837
      Location:360 → 441
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

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