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    LOC116064324 ras-GEF domain-containing family member 1C [ Sander lucioperca (pikeperch) ]

    Gene ID: 116064324, updated on 21-Aug-2024

    Summary

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    Gene symbol
    LOC116064324
    Gene description
    ras-GEF domain-containing family member 1C
    See related
    EnsemblRapid:ENSSLUG00000008854
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sander lucioperca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Sander
    Also known as
    rasgef1c
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    Genomic context

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    See LOC116064324 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current SLUC_FBN_1.2 (GCF_008315115.2) 1 NC_050173.1 (35506701..35567691)
    100 previous assembly SLUC_FBN_1 (GCF_008315115.1) Unplaced Scaffold NW_022173012.1 (5242424..5265413, complement)

    Chromosome 1 - NC_050173.1Genomic Context describing neighboring genes Neighboring gene glutamine-fructose-6-phosphate transaminase 2 Neighboring gene mitogen-activated protein kinase 9 Neighboring gene uncharacterized si:ch211-247j9.1 Neighboring gene transmembrane protein 126A Neighboring gene CDC-like kinase 4a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Ras protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-GEF domain-containing family member 1C
    Names
    RasGEF domain family member 1C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sander lucioperca Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SLUC_FBN_1.2 Primary Assembly

    Genomic

    1. NC_050173.1 Reference SLUC_FBN_1.2 Primary Assembly

      Range
      35506701..35567691
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036007619.1 → XP_035863512.1  ras-GEF domain-containing family member 1C

      UniProtKB/TrEMBL
      A0A8C9Y6T7, A0A8D0CY57
      Related
      ENSSLUP00000019773.2, ENSSLUT00000020407.2
      Conserved Domains (2) summary
      cd06224
      Location:53 → 171
      REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
      pfam00617
      Location:222 → 416
      RasGEF; RasGEF domain

    2. XM_031319462.2 → XP_031175322.1  ras-GEF domain-containing family member 1C

      UniProtKB/TrEMBL
      A0A8C9Y6T7, A0A8D0CY57
      Conserved Domains (2) summary
      cd06224
      Location:53 → 171
      REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
      pfam00617
      Location:222 → 416
      RasGEF; RasGEF domain
    Nucleotide Protein
    Heading Accession and Version

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