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    Cdyl chromodomain Y like [ Onychomys torridus (southern grasshopper mouse) ]

    Gene ID: 118584532, updated on 20-Mar-2024

    Summary

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    Gene symbol
    Cdyl
    Gene description
    chromodomain Y like
    See related
    EnsemblRapid:ENSOTOG00005001040
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Onychomys torridus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Onychomys
    Orthologs
    human mouse all
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    Genomic context

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    See Cdyl in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current mOncTor1.1 (GCF_903995425.1) 5 NC_050447.1 (108791619..108941578)

    Chromosome 5 - NC_050447.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene 40S ribosomal protein S10-like Neighboring gene ribonuclease P/MRP subunit p40 Neighboring gene transfer RNA alanine (anticodon AGC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_050447.1 Chromosome 5 Reference mOncTor1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chromodomain Y-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Onychomys torridus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOncTor1.1

    Genomic

    1. NC_050447.1 Reference mOncTor1.1

      Range
      108791619..108941578
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036188842.1 → XP_036044735.1  chromodomain Y-like protein isoform X1

      Related
      ENSOTOP00005001371.1, ENSOTOT00005001584.1
      Conserved Domains (2) summary
      cd06558
      Location:290 → 486
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
      cd18634
      Location:6 → 57
      CD_CDY; chromodomain of the Chromodomain Y-like protein family

    2. XM_036188843.1 → XP_036044736.1  chromodomain Y-like protein isoform X2

      Conserved Domains (1) summary
      cd06558
      Location:55 → 251
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
    Nucleotide Protein
    Heading Accession and Version

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