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    LOC118896961 interferon omega-1-like [ Balaenoptera musculus (blue whale) ]

    Gene ID: 118896961, updated on 16-Dec-2023

    Summary

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    Gene symbol
    LOC118896961
    Gene description
    interferon omega-1-like
    See related
    EnsemblRapid:ENSBMSG00010000120
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Balaenoptera musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
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    Genomic context

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    See LOC118896961 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current mBalMus1.pri.v3 (GCF_009873245.2) 6 NC_045790.1 (46056462..46057210)

    Chromosome 6 - NC_045790.1Genomic Context describing neighboring genes Neighboring gene interferon omega-1-like Neighboring gene interferon alpha-1-like Neighboring gene interferon alpha-13-like Neighboring gene interferon alpha-1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045790.1 Chromosome 6 Reference mBalMus1.pri.v3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables type I interferon receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in B cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in B cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in T cell activation involved in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytokine-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in humoral immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in natural killer cell activation involved in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of peptidyl-serine phosphorylation of STAT protein IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to exogenous dsRNA IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    interferon omega-1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Balaenoptera musculus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mBalMus1.pri.v3 Primary Assembly

    Genomic

    1. NC_045790.1 Reference mBalMus1.pri.v3 Primary Assembly

      Range
      46056462..46057210
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036855626.1 → XP_036711521.1  interferon omega-1-like

      UniProtKB/TrEMBL
      A0A8B8XPW6, A0A8C0HSC3
      Related
      ENSBMSP00010000124.1, ENSBMST00010000140.2
      Conserved Domains (1) summary
      pfam00143
      Location:58 → 217
      Interferon; Interferon alpha/beta domain
    Nucleotide Protein
    Heading Accession and Version

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