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    LOC118936543 zinc finger protein PLAGL2-like [ Oncorhynchus mykiss (rainbow trout) ]

    Gene ID: 118936543, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC118936543
    Gene description
    zinc finger protein PLAGL2-like
    See related
    Ensembl:ENSOMYG00000074223
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus mykiss
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
    Also known as
    plagl2
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    Genomic context

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    See LOC118936543 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current USDA_OmykA_1.1 (GCF_013265735.2) 16 NC_048580.1 (70127253..70133280, complement)

    Chromosome 16 - NC_048580.1Genomic Context describing neighboring genes Neighboring gene tyrosine-protein kinase HCK Neighboring gene transmembrane 9 superfamily member 4 Neighboring gene uncharacterized LOC118939578 Neighboring gene uncharacterized LOC110492666

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_048580.1 Chromosome 16 Reference USDA_OmykA_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein PLAGL2-like
    Names
    pleiomorphic adenoma protein-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_OmykA_1.1 Primary Assembly

    Genomic

    1. NC_048580.1 Reference USDA_OmykA_1.1 Primary Assembly

      Range
      70127253..70133280 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036947683.1 → XP_036803578.1  zinc finger protein PLAGL2-like

      UniProtKB/TrEMBL
      A0A8K9WRW4
      Related
      ENSOMYP00000119792.1, ENSOMYT00000153219.1
      Conserved Domains (3) summary
      COG5189
      Location:76 → 157
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      COG5236
      Location:128 → 254
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      sd00017
      Location:54 → 74
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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