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    foxg1a forkhead box G1a [ Syngnathus acus (greater pipefish) ]

    Gene ID: 119116712, updated on 21-Mar-2024

    Summary

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    Gene symbol
    foxg1a
    Gene description
    forkhead box G1a
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Syngnathus acus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathus
    Orthologs
    human zebrafish all
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    Genomic context

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    See foxg1a in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current fSynAcu1.2 (GCF_901709675.1) 22 NC_051106.1 (609986..612246, complement)

    Chromosome 22 - NC_051106.1Genomic Context describing neighboring genes Neighboring gene protein kinase D1 Neighboring gene uncharacterized LOC119116764 Neighboring gene uncharacterized LOC119116757 Neighboring gene uncharacterized LOC119116762 Neighboring gene uncharacterized LOC119116747

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051106.1 Chromosome 22 Reference fSynAcu1.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein G1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Syngnathus acus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSynAcu1.2

    Genomic

    1. NC_051106.1 Reference fSynAcu1.2

      Range
      609986..612246 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037242378.1 → XP_037098273.1  forkhead box protein G1

      Conserved Domains (1) summary
      cd20021
      Location:143 → 221
      FH_FOXG; Forkhead (FH) domain found in the Forkhead box protein G (FOXG) subfamily
    Nucleotide Protein
    Heading Accession and Version

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