U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC119650902 RUN and FYVE domain-containing protein 2 [ Hermetia illucens (black soldier fly) ]

    Gene ID: 119650902, updated on 10-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC119650902
    Gene description
    RUN and FYVE domain-containing protein 2
    Locus tag
    HERILL_LOCUS6971
    See related
    EnsemblRapid:LOC119650902
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hermetia illucens
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Stratiomyomorpha; Stratiomyidae; Hermetiinae; Hermetia
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC119650902 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current iHerIll2.2.curated.20191125 (GCF_905115235.1) 3 NC_051851.1 (24080135..24145890)

    Chromosome 3 - NC_051851.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119650940 Neighboring gene Zinc transporter Zip99C Neighboring gene pinin Neighboring gene alpha-Mannosidase class I b Neighboring gene BRD4 interacting chromatin remodeling complex associated protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_051851.1 Chromosome 3 Reference iHerIll2.2.curated.20191125 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    RUN and FYVE domain-containing protein 2; protein RUFY3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Hermetia illucens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference iHerIll2.2.curated.20191125 Primary Assembly

    Genomic

    1. NC_051851.1 Reference iHerIll2.2.curated.20191125 Primary Assembly

      Range
      24080135..24145890
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038054087.1 → XP_037910015.1  RUN and FYVE domain-containing protein 2 isoform X4

      Related
      XP_037910015.1, XM_038054087.1
      Conserved Domains (4) summary
      COG1196
      Location:375 → 589
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:272 → 467
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam01363
      Location:599 → 666
      FYVE; FYVE zinc finger
      pfam02759
      Location:111 → 232
      RUN; RUN domain

    2. XM_038054088.1 → XP_037910016.1  protein RUFY3 isoform X5

      Related
      XP_037910016.1, XM_038054088.1
      Conserved Domains (2) summary
      TIGR02168
      Location:331 → 553
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:168 → 289
      RUN; RUN domain

    3. XM_038054084.1 → XP_037910012.1  RUN and FYVE domain-containing protein 2 isoform X1

      Related
      XP_037910012.1, XM_038054084.1
      Conserved Domains (4) summary
      COG1196
      Location:432 → 646
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:329 → 524
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam01363
      Location:656 → 723
      FYVE; FYVE zinc finger
      pfam02759
      Location:168 → 289
      RUN; RUN domain

    4. XM_038054083.1 → XP_037910011.1  RUN and FYVE domain-containing protein 2 isoform X1

      Related
      XP_037910011.1, XM_038054083.1
      Conserved Domains (4) summary
      COG1196
      Location:432 → 646
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:329 → 524
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam01363
      Location:656 → 723
      FYVE; FYVE zinc finger
      pfam02759
      Location:168 → 289
      RUN; RUN domain

    5. XM_038054086.1 → XP_037910014.1  RUN and FYVE domain-containing protein 2 isoform X3

      Related
      XP_037910014.1, XM_038054086.1
      Conserved Domains (4) summary
      COG1196
      Location:393 → 607
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:290 → 485
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam01363
      Location:617 → 684
      FYVE; FYVE zinc finger
      pfam02759
      Location:129 → 250
      RUN; RUN domain

    6. XM_038054089.1 → XP_037910017.1  protein RUFY3 isoform X6

      Related
      XP_037910017.1, XM_038054089.1
      Conserved Domains (2) summary
      COG1196
      Location:339 → 526
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:168 → 289
      RUN; RUN domain

    7. XM_038054085.1 → XP_037910013.1  RUN and FYVE domain-containing protein 2 isoform X2

      Related
      XP_037910013.1, XM_038054085.1
      Conserved Domains (4) summary
      COG1196
      Location:405 → 619
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:302 → 497
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam01363
      Location:629 → 696
      FYVE; FYVE zinc finger
      pfam02759
      Location:141 → 262
      RUN; RUN domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases