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    Sec15 exocyst complex component Sec15 [ Acyrthosiphon pisum (pea aphid) ]

    Gene ID: 100167290, updated on 22-May-2024

    Summary

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    Gene symbol
    Sec15
    Gene description
    exocyst complex component Sec15
    See related
    APHIDBASE:ACYPI008098; EnsemblRapid:LOC100167290
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acyrthosiphon pisum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
    Orthologs
    fruit fly all
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    Genomic context

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    See Sec15 in Genome Data Viewer
    Location:
    chromosome: A1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (120286132..120289321, complement)
    102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003384197.1 (303389..306612)

    Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100572498 Neighboring gene conserved oligomeric Golgi complex subunit 4 Neighboring gene uncharacterized LOC103310291 Neighboring gene protein VAC14 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle tethering involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exocyst complex component 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Genomic

    1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

      Range
      120286132..120289321 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001944054.5 → XP_001944089.1  exocyst complex component 6

      UniProtKB/TrEMBL
      A0A8R2A2J5
      Related
      XP_001944089.1, XM_001944054.5
      Conserved Domains (1) summary
      pfam04091
      Location:421 → 724
      Sec15; Exocyst complex subunit Sec15-like
    Nucleotide Protein
    Heading Accession and Version

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