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    L3MBTL1 L3MBTL histone methyl-lysine binding protein 1 [ Anas platyrhynchos (mallard) ]

    Gene ID: 101796220, updated on 8-Mar-2024

    Summary

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    Gene symbol
    L3MBTL1
    Gene description
    L3MBTL histone methyl-lysine binding protein 1
    Locus tag
    Anapl_11016
    See related
    EnsemblRapid:ENSAPLG00030021100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anas platyrhynchos
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
    Orthologs
    human mouse all
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    Genomic context

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    See L3MBTL1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    104 current ZJU1.0 (GCF_015476345.1) 21 NC_051792.1 (262418..301543, complement)
    103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 21 NC_040066.1 (155910..195685, complement)

    Chromosome 21 - NC_051792.1Genomic Context describing neighboring genes Neighboring gene dynein light chain roadblock-type 1 Neighboring gene microtubule associated protein 1 light chain 3 alpha Neighboring gene uncharacterized LOC110351747 Neighboring gene serine and arginine rich splicing factor 6 Neighboring gene ubiquitin conjugating enzyme E2 V1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lethal(3)malignant brain tumor-like protein 1
    Names
    L3MBTL1, histone methyl-lysine binding protein
    Lethal(3)malignant brain tumor-like protein
    l(3)mbt-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ZJU1.0 Primary Assembly

    Genomic

    1. NC_051792.1 Reference ZJU1.0 Primary Assembly

      Range
      262418..301543 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038166059.1 → XP_038021987.1  lethal(3)malignant brain tumor-like protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8B9T5L3
      Related
      ENSAPLP00030035437.1, ENSAPLT00030055171.1
      Conserved Domains (3) summary
      cd09582
      Location:771 → 836
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:517 → 609
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam01530
      Location:645 → 673
      zf-C2HC; Zinc finger, C2HC type

    2. XM_027473117.2 → XP_027328918.2  lethal(3)malignant brain tumor-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8B9T5L3
      Related
      ENSAPLP00030035362.1, ENSAPLT00030055067.1
      Conserved Domains (3) summary
      cd09582
      Location:807 → 872
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:553 → 645
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam01530
      Location:681 → 709
      zf-C2HC; Zinc finger, C2HC type

    3. XM_027473113.2 → XP_027328914.2  lethal(3)malignant brain tumor-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8B9T5L3, U3J322
      Conserved Domains (3) summary
      cd09582
      Location:810 → 875
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:556 → 648
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam01530
      Location:684 → 712
      zf-C2HC; Zinc finger, C2HC type
    Nucleotide Protein
    Heading Accession and Version

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