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    Phf20l1 PHD finger protein 20 like 1 [ Arvicola amphibius (Eurasian water vole) ]

    Gene ID: 119822984, updated on 21-Mar-2024

    Summary

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    Gene symbol
    Phf20l1
    Gene description
    PHD finger protein 20 like 1
    See related
    EnsemblRapid:ENSAAPG00005013418
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arvicola amphibius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
    Orthologs
    human mouse all
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    Genomic context

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    See Phf20l1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    101 current mArvAmp1.2 (GCF_903992535.2) 9 NC_052055.2 (26514869..26580604)
    100 previous assembly mArvAmp1.1 (GCF_903992535.1) 9 NC_052055.1 (36836502..36902238, complement)

    Chromosome 9 - NC_052055.2Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 11 Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane protein 71 Neighboring gene thyroglobulin Neighboring gene Src like adaptor Neighboring gene cellular communication network factor 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of NSL complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger protein 20-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mArvAmp1.2

    Genomic

    1. NC_052055.2 Reference mArvAmp1.2

      Range
      26514869..26580604
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038342707.2 → XP_038198635.1  PHD finger protein 20-like protein 1 isoform X2

      Related
      ENSAAPP00005017237.2, ENSAAPT00005018868.2
      Conserved Domains (4) summary
      cd15633
      Location:683 → 728
      PHD_PHF20L1; PHD finger found in PHD finger protein 20-like protein 1 (P20L1)
      pfam16660
      Location:318 → 383
      PHD20L1_u1; PHD finger protein 20-like protein 1
      cd20454
      Location:86 → 143
      Tudor_PHF20L1; Tudor domain found in PHD finger protein 20-like protein 1 (PHF20L1) and similar proteins
      cl17705
      Location:3 → 68
      MBT; mbt repeat

    2. XM_038342706.1 → XP_038198634.1  PHD finger protein 20-like protein 1 isoform X1

      Conserved Domains (3) summary
      pfam16660
      Location:292 → 357
      PHD20L1_u1; PHD finger protein 20-like protein 1
      cd20454
      Location:86 → 144
      Tudor_PHF20L1; Tudor domain found in PHD finger protein 20-like protein 1 (PHF20L1) and similar proteins
      cl17705
      Location:3 → 68
      MBT; mbt repeat
    Nucleotide Protein
    Heading Accession and Version

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