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    LOC111094960 paraneoplastic antigen Ma6E-like [ Canis lupus familiaris (dog) ]

    Gene ID: 111094960, updated on 22-Jan-2024

    Summary

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    Gene symbol
    LOC111094960
    Gene description
    paraneoplastic antigen Ma6E-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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    Genomic context

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    See LOC111094960 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (123109578..123111294)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (106253685..106255382)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (122191418..122193134)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (119825954..119827670)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (122316328..122318041)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene NAD(P) dependent steroid dehydrogenase-like Neighboring gene zinc finger protein 185 with LIM domain Neighboring gene paraneoplastic antigen-like protein 6B Neighboring gene uncharacterized LOC111094739 Neighboring gene PWWP domain-containing DNA repair factor 3B-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: paraneoplastic antigen Ma6E-like; paraneoplastic antigen Ma6E-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      123109578..123111294
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038449231.1 → XP_038305159.1  LOW QUALITY PROTEIN: paraneoplastic antigen Ma6E-like isoform X1

      Conserved Domains (2) summary
      TIGR00927
      Location:114 → 340
      2A1904; K+-dependent Na+/Ca+ exchanger
      pfam14893
      Location:1 → 525
      PNMA

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      119825954..119827670
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038524886.1 → XP_038380814.1  LOW QUALITY PROTEIN: paraneoplastic antigen Ma6E-like isoform X1

      Conserved Domains (2) summary
      TIGR00927
      Location:114 → 340
      2A1904; K+-dependent Na+/Ca+ exchanger
      pfam14893
      Location:1 → 525
      PNMA

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      122316328..122318041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038651178.1 → XP_038507106.1  LOW QUALITY PROTEIN: paraneoplastic antigen Ma6E-like isoform X1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      122191418..122193134
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038588853.1 → XP_038444781.1  LOW QUALITY PROTEIN: paraneoplastic antigen Ma6E-like isoform X1

      Conserved Domains (2) summary
      TIGR00927
      Location:114 → 340
      2A1904; K+-dependent Na+/Ca+ exchanger
      pfam14893
      Location:1 → 525
      PNMA

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      106253685..106255382
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022416432.1 → XP_022272140.1  paraneoplastic antigen Ma6E-like isoform X2

      UniProtKB/TrEMBL
      A0A8C0SU84
      Conserved Domains (3) summary
      pfam01391
      Location:263 → 331
      Collagen; Collagen triple helix repeat (20 copies)
      pfam14893
      Location:312 → 518
      PNMA
      cl27511
      Location:107 → 333
      Na_Ca_ex; Sodium/calcium exchanger protein
    Nucleotide Protein
    Heading Accession and Version

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