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    hh hedgehog signaling protein [ Drosophila sechellia ]

    Gene ID: 6607540, updated on 29-May-2024

    Summary

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    Gene symbol
    hh
    Gene description
    hedgehog signaling protein
    Locus tag
    Dsec_GM23589
    See related
    EnsemblRapid:LOC6607540
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM23589; GM23589-PA
    Orthologs
    fruit fly all
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    Genomic context

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    Location:
    chromosome: 3R
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (21695101..21708355, complement)

    Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene Centaurin beta 1A Neighboring gene zinc finger protein 480 Neighboring gene uncharacterized LOC6607539 Neighboring gene RING finger protein unk Neighboring gene Vacuolar H[+] ATPase AC39 subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045952.1 Chromosome 3R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables patched binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell fate specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intein-mediated protein splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein autoprocessing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in smoothened signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein hedgehog
    Names
    Dsec\GM23589
    Dsec\GM23589-PA
    desert hedgehog signaling molecule-like
    dsec_GLEANR_6625
    sonic hedgehog signaling molecule

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045952.1 Reference ASM438219v1

      Range
      21695101..21708355 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002032273.2 → XP_002032309.1  protein hedgehog

      See identical proteins and their annotated locations for XP_002032309.1

      UniProtKB/Swiss-Prot
      B4HFB7
      Related
      XP_002032309.1, XM_002032273.2
      Conserved Domains (3) summary
      cd00081
      Location:252 → 394
      Hint; Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In protein splicing an intervening polypeptide sequence - the intein - is excised from a protein, ...
      pfam01079
      Location:248 → 459
      Hint; Hint module
      pfam01085
      Location:93 → 237
      HH_signal; Hedgehog amino-terminal signalling domain
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B4HFB7.1 GenPept UniProtKB/Swiss-Prot:B4HFB7

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