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    TRIADDRAFT_33041 uncharacterized protein [ Trichoplax adhaerens ]

    Gene ID: 6758993, updated on 17-Feb-2024

    Summary

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    Gene symbol
    TRIADDRAFT_33041
    Gene description
    uncharacterized protein
    Locus tag
    TRIADDRAFT_33041
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichoplax adhaerens (strain: Grell-BS-1999)
    Lineage
    Eukaryota; Metazoa; Placozoa; Uniplacotomia; Trichoplacea; Trichoplacidae; Trichoplax
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    Genomic context

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    See TRIADDRAFT_33041 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    4

    NW_002060969.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene expressed hypothetical protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002060969.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Trichoplax genome and the nature of placozoans. Srivastava M, et al. Nature, 2008 Aug 21. PMID 18719581
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in small-subunit processome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_002117737.1
    • similar to GA17094-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002060969.1 Reference assembly

      Range
      205947..207999
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002117701.1 → XP_002117737.1  uncharacterized protein TRIADDRAFT_33041 [Trichoplax adhaerens]

      See identical proteins and their annotated locations for XP_002117737.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B3SBY6
      Conserved Domains (1) summary
      cd12263
      Location:6 → 109
      RRM_ABT1_like; RNA recognition motif found in activator of basal transcription 1 (ABT1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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